Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
KCNE3Q9Y6H6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNE3Q9Y6H6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
KCNE3Q9Y6H6 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNE3Q9Y6H6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
KCNE3Q9Y6H6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNE3Q9Y6H6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNE3Q9Y6H6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNE3Q9Y6H6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNE3Q9Y6H6 RP9P-202ENST00000450133 1212 ntBASIC22.32■■□□□ 1.16
KCNE3Q9Y6H6 AC093536.1-201ENST00000569153 554 ntBASIC22.32■■□□□ 1.16
KCNE3Q9Y6H6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
KCNE3Q9Y6H6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNE3Q9Y6H6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.31■■□□□ 1.16
KCNE3Q9Y6H6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 AC007029.1-201ENST00000604183 313 ntBASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNE3Q9Y6H6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNE3Q9Y6H6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNE3Q9Y6H6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.29■■□□□ 1.16
KCNE3Q9Y6H6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNE3Q9Y6H6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNE3Q9Y6H6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNE3Q9Y6H6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNE3Q9Y6H6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNE3Q9Y6H6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
KCNE3Q9Y6H6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNE3Q9Y6H6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.27■■□□□ 1.16
KCNE3Q9Y6H6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNE3Q9Y6H6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
KCNE3Q9Y6H6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNE3Q9Y6H6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 AC022211.4-201ENST00000625094 2161 ntBASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNE3Q9Y6H6 AC097639.1-201ENST00000565519 1891 ntBASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KCNE3Q9Y6H6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms