Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.63■■□□□ 1.21
NEUROD4Q9HD90 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 AC092296.2-201ENST00000589470 999 ntBASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEUROD4Q9HD90 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEUROD4Q9HD90 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.6■■□□□ 1.21
NEUROD4Q9HD90 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 SMPD5-203ENST00000639008 1464 ntBASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
NEUROD4Q9HD90 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.58■■□□□ 1.21
NEUROD4Q9HD90 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.58■■□□□ 1.21
NEUROD4Q9HD90 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
NEUROD4Q9HD90 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NEUROD4Q9HD90 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
NEUROD4Q9HD90 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NEUROD4Q9HD90 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NEUROD4Q9HD90 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 ECEL1P2-201ENST00000461596 1295 ntBASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NEUROD4Q9HD90 AC142381.3-201ENST00000568208 1670 ntBASIC22.56■■□□□ 1.2
NEUROD4Q9HD90 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NEUROD4Q9HD90 AC135731.1-201ENST00000569415 2548 ntBASIC22.56■■□□□ 1.2
NEUROD4Q9HD90 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 AC022413.1-201ENST00000624602 984 ntBASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NEUROD4Q9HD90 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NEUROD4Q9HD90 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEUROD4Q9HD90 AC097639.1-201ENST00000565519 1891 ntBASIC22.54■■□□□ 1.2
NEUROD4Q9HD90 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEUROD4Q9HD90 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEUROD4Q9HD90 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.52■■□□□ 1.2
NEUROD4Q9HD90 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NEUROD4Q9HD90 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEUROD4Q9HD90 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
NEUROD4Q9HD90 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEUROD4Q9HD90 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
NEUROD4Q9HD90 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NEUROD4Q9HD90 AC022211.4-201ENST00000625094 2161 ntBASIC22.51■■□□□ 1.19
NEUROD4Q9HD90 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.51■■□□□ 1.19
NEUROD4Q9HD90 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEUROD4Q9HD90 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEUROD4Q9HD90 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEUROD4Q9HD90 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEUROD4Q9HD90 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEUROD4Q9HD90 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.49■■□□□ 1.19
NEUROD4Q9HD90 RP9P-202ENST00000450133 1212 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms