Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 AC142472.1-201ENST00000612013 1741 ntBASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.23■□□□□ 0.99
PPP1R3EQ9H7J1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 AC008813.1-201ENST00000536597 885 ntBASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 AC010501.1-201ENST00000606270 1962 ntBASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPP1R3EQ9H7J1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.21■□□□□ 0.99
PPP1R3EQ9H7J1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPP1R3EQ9H7J1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPP1R3EQ9H7J1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 AC148477.6-201ENST00000623746 465 ntBASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PPP1R3EQ9H7J1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 AC068473.5-201ENST00000616428 2072 ntBASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.19■□□□□ 0.98
PPP1R3EQ9H7J1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.18■□□□□ 0.98
PPP1R3EQ9H7J1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP1R3EQ9H7J1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPP1R3EQ9H7J1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPP1R3EQ9H7J1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
PPP1R3EQ9H7J1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.16■□□□□ 0.98
PPP1R3EQ9H7J1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3EQ9H7J1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PPP1R3EQ9H7J1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PPP1R3EQ9H7J1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
PPP1R3EQ9H7J1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
PPP1R3EQ9H7J1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PPP1R3EQ9H7J1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 LINC00543-201ENST00000567234 1845 ntBASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3EQ9H7J1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3EQ9H7J1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3EQ9H7J1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PPP1R3EQ9H7J1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3EQ9H7J1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3EQ9H7J1 AC079834.2-201ENST00000609776 1949 ntBASIC21.12■□□□□ 0.97
PPP1R3EQ9H7J1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3EQ9H7J1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.12■□□□□ 0.97
PPP1R3EQ9H7J1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms