Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM2Q9C040 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
TRIM2Q9C040 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRIM2Q9C040 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 GPX1-201ENST00000419349 1106 ntBASIC22.01■■□□□ 1.11
TRIM2Q9C040 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 MIR3960-201ENST00000583311 91 ntBASIC22.01■■□□□ 1.11
TRIM2Q9C040 AC092296.2-201ENST00000589470 999 ntBASIC22.01■■□□□ 1.11
TRIM2Q9C040 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TRIM2Q9C040 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22■■□□□ 1.11
TRIM2Q9C040 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22■■□□□ 1.11
TRIM2Q9C040 SMPD5-203ENST00000639008 1464 ntBASIC22■■□□□ 1.11
TRIM2Q9C040 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22■■□□□ 1.11
TRIM2Q9C040 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 AC022413.1-201ENST00000624602 984 ntBASIC21.99■■□□□ 1.11
TRIM2Q9C040 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM2Q9C040 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM2Q9C040 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM2Q9C040 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM2Q9C040 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM2Q9C040 RARRES2P2-201ENST00000394842 485 ntBASIC21.97■■□□□ 1.11
TRIM2Q9C040 ECEL1P2-201ENST00000461596 1295 ntBASIC21.97■■□□□ 1.11
TRIM2Q9C040 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM2Q9C040 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM2Q9C040 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM2Q9C040 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.96■■□□□ 1.11
TRIM2Q9C040 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM2Q9C040 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM2Q9C040 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRIM2Q9C040 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM2Q9C040 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM2Q9C040 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM2Q9C040 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM2Q9C040 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM2Q9C040 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.94■■□□□ 1.1
TRIM2Q9C040 RNF126P1-201ENST00000567452 1320 ntBASIC21.94■■□□□ 1.1
TRIM2Q9C040 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TRIM2Q9C040 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM2Q9C040 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM2Q9C040 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM2Q9C040 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM2Q9C040 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms