Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRDL1Q9BU40 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRDL1Q9BU40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHRDL1Q9BU40 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRDL1Q9BU40 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRDL1Q9BU40 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRDL1Q9BU40 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHRDL1Q9BU40 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRDL1Q9BU40 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.91■□□□□ 0.62
CHRDL1Q9BU40 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHRDL1Q9BU40 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRDL1Q9BU40 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHRDL1Q9BU40 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHRDL1Q9BU40 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRDL1Q9BU40 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRDL1Q9BU40 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRDL1Q9BU40 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.89■□□□□ 0.61
CHRDL1Q9BU40 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.89■□□□□ 0.61
CHRDL1Q9BU40 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRDL1Q9BU40 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRDL1Q9BU40 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.87■□□□□ 0.61
CHRDL1Q9BU40 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRDL1Q9BU40 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRDL1Q9BU40 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRDL1Q9BU40 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRDL1Q9BU40 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRDL1Q9BU40 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRDL1Q9BU40 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 ERN1-208ENST00000606895 2068 ntBASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 AC060814.1-201ENST00000554326 538 ntBASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRDL1Q9BU40 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRDL1Q9BU40 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CHRDL1Q9BU40 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRDL1Q9BU40 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.83■□□□□ 0.61
CHRDL1Q9BU40 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHRDL1Q9BU40 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHRDL1Q9BU40 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 AL157400.5-201ENST00000507624 621 ntBASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRDL1Q9BU40 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRDL1Q9BU40 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRDL1Q9BU40 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDL1Q9BU40 MIR4449-201ENST00000578365 66 ntBASIC18.81■□□□□ 0.6
CHRDL1Q9BU40 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRDL1Q9BU40 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRDL1Q9BU40 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRDL1Q9BU40 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms