Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCGF1Q9BSM1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20■□□□□ 0.79
PCGF1Q9BSM1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCGF1Q9BSM1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCGF1Q9BSM1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCGF1Q9BSM1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCGF1Q9BSM1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.98■□□□□ 0.79
PCGF1Q9BSM1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 AC018755.3-202ENST00000596210 929 ntBASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 BHLHE23-202ENST00000612929 1109 ntBASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCGF1Q9BSM1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 SPCS2P3-201ENST00000500401 656 ntBASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.96■□□□□ 0.79
PCGF1Q9BSM1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 MIR6765-201ENST00000614092 87 ntBASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCGF1Q9BSM1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.94■□□□□ 0.78
PCGF1Q9BSM1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCGF1Q9BSM1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 AC139795.1-202ENST00000500444 432 ntBASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.92■□□□□ 0.78
PCGF1Q9BSM1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCGF1Q9BSM1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCGF1Q9BSM1 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.9■□□□□ 0.78
PCGF1Q9BSM1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.9■□□□□ 0.78
PCGF1Q9BSM1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.9■□□□□ 0.78
PCGF1Q9BSM1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCGF1Q9BSM1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCGF1Q9BSM1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCGF1Q9BSM1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.89■□□□□ 0.77
PCGF1Q9BSM1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCGF1Q9BSM1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.89■□□□□ 0.77
PCGF1Q9BSM1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms