Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HDM4Q96D70 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
R3HDM4Q96D70 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.72■□□□□ 0.75
R3HDM4Q96D70 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.71■□□□□ 0.75
R3HDM4Q96D70 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
R3HDM4Q96D70 MIR219A2-201ENST00000608502 1504 ntBASIC19.71■□□□□ 0.75
R3HDM4Q96D70 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 NTF6A-201ENST00000591175 560 ntBASIC19.7■□□□□ 0.74
R3HDM4Q96D70 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HDM4Q96D70 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.69■□□□□ 0.74
R3HDM4Q96D70 AC148477.6-201ENST00000623746 465 ntBASIC19.69■□□□□ 0.74
R3HDM4Q96D70 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
R3HDM4Q96D70 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
R3HDM4Q96D70 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
R3HDM4Q96D70 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
R3HDM4Q96D70 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
R3HDM4Q96D70 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.68■□□□□ 0.74
R3HDM4Q96D70 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HDM4Q96D70 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
R3HDM4Q96D70 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
R3HDM4Q96D70 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 AC012354.3-201ENST00000623734 483 ntBASIC19.66■□□□□ 0.74
R3HDM4Q96D70 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
R3HDM4Q96D70 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM4Q96D70 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
R3HDM4Q96D70 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.65■□□□□ 0.74
R3HDM4Q96D70 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM4Q96D70 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
R3HDM4Q96D70 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.65■□□□□ 0.74
R3HDM4Q96D70 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM4Q96D70 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.64■□□□□ 0.73
R3HDM4Q96D70 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM4Q96D70 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HDM4Q96D70 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.63■□□□□ 0.73
R3HDM4Q96D70 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.63■□□□□ 0.73
R3HDM4Q96D70 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM4Q96D70 AC060814.1-201ENST00000554326 538 ntBASIC19.63■□□□□ 0.73
R3HDM4Q96D70 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
R3HDM4Q96D70 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
R3HDM4Q96D70 AL359258.2-201ENST00000564063 1566 ntBASIC19.62■□□□□ 0.73
R3HDM4Q96D70 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HDM4Q96D70 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HDM4Q96D70 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
R3HDM4Q96D70 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HDM4Q96D70 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HDM4Q96D70 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
R3HDM4Q96D70 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
R3HDM4Q96D70 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
R3HDM4Q96D70 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.59■□□□□ 0.73
R3HDM4Q96D70 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
R3HDM4Q96D70 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
R3HDM4Q96D70 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms