Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
C3orf49Q96BT1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 HSD17B1P1-201ENST00000590052 955 ntBASIC21.88■■□□□ 1.09
C3orf49Q96BT1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
C3orf49Q96BT1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C3orf49Q96BT1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C3orf49Q96BT1 RP9P-202ENST00000450133 1212 ntBASIC21.87■■□□□ 1.09
C3orf49Q96BT1 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.87■■□□□ 1.09
C3orf49Q96BT1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.87■■□□□ 1.09
C3orf49Q96BT1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
C3orf49Q96BT1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C3orf49Q96BT1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 AC007029.1-201ENST00000604183 313 ntBASIC21.86■■□□□ 1.09
C3orf49Q96BT1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
C3orf49Q96BT1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.85■■□□□ 1.09
C3orf49Q96BT1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 AC093536.1-201ENST00000569153 554 ntBASIC21.85■■□□□ 1.09
C3orf49Q96BT1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
C3orf49Q96BT1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
C3orf49Q96BT1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
C3orf49Q96BT1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
C3orf49Q96BT1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C3orf49Q96BT1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.82■■□□□ 1.08
C3orf49Q96BT1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.82■■□□□ 1.08
C3orf49Q96BT1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C3orf49Q96BT1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C3orf49Q96BT1 AC135731.1-201ENST00000569415 2548 ntBASIC21.81■■□□□ 1.08
C3orf49Q96BT1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C3orf49Q96BT1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf49Q96BT1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C3orf49Q96BT1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
C3orf49Q96BT1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
C3orf49Q96BT1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
C3orf49Q96BT1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C3orf49Q96BT1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
C3orf49Q96BT1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C3orf49Q96BT1 RNF126P1-201ENST00000567452 1320 ntBASIC21.78■■□□□ 1.08
C3orf49Q96BT1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 AC097639.1-201ENST00000565519 1891 ntBASIC21.77■■□□□ 1.08
C3orf49Q96BT1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 RAP2CP1-202ENST00000605179 643 ntBASIC21.77■■□□□ 1.08
C3orf49Q96BT1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.77■■□□□ 1.08
C3orf49Q96BT1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
C3orf49Q96BT1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
C3orf49Q96BT1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms