Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM4Q8WVI0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.55■□□□□ 0.88
SMIM4Q8WVI0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMIM4Q8WVI0 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.55■□□□□ 0.88
SMIM4Q8WVI0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SMIM4Q8WVI0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 MIR6090-201ENST00000622481 60 ntBASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM4Q8WVI0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.53■□□□□ 0.88
SMIM4Q8WVI0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM4Q8WVI0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM4Q8WVI0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM4Q8WVI0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM4Q8WVI0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
SMIM4Q8WVI0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SMIM4Q8WVI0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM4Q8WVI0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM4Q8WVI0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM4Q8WVI0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 AC141586.4-201ENST00000624558 1573 ntBASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM4Q8WVI0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMIM4Q8WVI0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM4Q8WVI0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM4Q8WVI0 AC136428.2-201ENST00000563187 214 ntBASIC20.48■□□□□ 0.87
SMIM4Q8WVI0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM4Q8WVI0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.47■□□□□ 0.87
SMIM4Q8WVI0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMIM4Q8WVI0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
SMIM4Q8WVI0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMIM4Q8WVI0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMIM4Q8WVI0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMIM4Q8WVI0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 AC005559.1-201ENST00000589661 871 ntBASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 CLDN5-201ENST00000403084 2357 ntBASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
SMIM4Q8WVI0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms