Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.64■■□□□ 1.37
RDH11Q8TC12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
RDH11Q8TC12 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.63■■□□□ 1.37
RDH11Q8TC12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.63■■□□□ 1.37
RDH11Q8TC12 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.63■■□□□ 1.37
RDH11Q8TC12 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RDH11Q8TC12 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH11Q8TC12 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH11Q8TC12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.62■■□□□ 1.37
RDH11Q8TC12 AC126177.7-201ENST00000547904 679 ntBASIC23.62■■□□□ 1.37
RDH11Q8TC12 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
RDH11Q8TC12 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH11Q8TC12 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
RDH11Q8TC12 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH11Q8TC12 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RDH11Q8TC12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RDH11Q8TC12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.61■■□□□ 1.37
RDH11Q8TC12 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.61■■□□□ 1.37
RDH11Q8TC12 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
RDH11Q8TC12 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RDH11Q8TC12 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.61■■□□□ 1.37
RDH11Q8TC12 AP003733.4-201ENST00000623785 1697 ntBASIC23.6■■□□□ 1.37
RDH11Q8TC12 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH11Q8TC12 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.6■■□□□ 1.37
RDH11Q8TC12 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.6■■□□□ 1.37
RDH11Q8TC12 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RDH11Q8TC12 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RDH11Q8TC12 AC097639.1-201ENST00000565519 1891 ntBASIC23.6■■□□□ 1.37
RDH11Q8TC12 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RDH11Q8TC12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RDH11Q8TC12 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.59■■□□□ 1.37
RDH11Q8TC12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RDH11Q8TC12 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RDH11Q8TC12 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RDH11Q8TC12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RDH11Q8TC12 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.57■■□□□ 1.36
RDH11Q8TC12 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RDH11Q8TC12 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.57■■□□□ 1.36
RDH11Q8TC12 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
RDH11Q8TC12 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RDH11Q8TC12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
RDH11Q8TC12 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RDH11Q8TC12 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.56■■□□□ 1.36
RDH11Q8TC12 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RDH11Q8TC12 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.56■■□□□ 1.36
RDH11Q8TC12 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RDH11Q8TC12 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RDH11Q8TC12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.56■■□□□ 1.36
RDH11Q8TC12 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.55■■□□□ 1.36
RDH11Q8TC12 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RDH11Q8TC12 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RDH11Q8TC12 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RDH11Q8TC12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RDH11Q8TC12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RDH11Q8TC12 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RDH11Q8TC12 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RDH11Q8TC12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RDH11Q8TC12 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.53■■□□□ 1.36
RDH11Q8TC12 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.53■■□□□ 1.36
RDH11Q8TC12 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RDH11Q8TC12 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RDH11Q8TC12 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RDH11Q8TC12 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RDH11Q8TC12 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RDH11Q8TC12 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RDH11Q8TC12 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RDH11Q8TC12 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.51■■□□□ 1.35
RDH11Q8TC12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.51■■□□□ 1.35
RDH11Q8TC12 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RDH11Q8TC12 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RDH11Q8TC12 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RDH11Q8TC12 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RDH11Q8TC12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.51■■□□□ 1.35
RDH11Q8TC12 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RDH11Q8TC12 SLC6A10P-202ENST00000431994 2058 ntBASIC23.5■■□□□ 1.35
RDH11Q8TC12 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
RDH11Q8TC12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RDH11Q8TC12 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RDH11Q8TC12 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RDH11Q8TC12 CR559946.2-201ENST00000623684 991 ntBASIC23.5■■□□□ 1.35
RDH11Q8TC12 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RDH11Q8TC12 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RDH11Q8TC12 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RDH11Q8TC12 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RDH11Q8TC12 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.49■■□□□ 1.35
RDH11Q8TC12 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms