Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 AC092028.1-203ENST00000608262 953 ntBASIC22.85■■□□□ 1.25
SNIP1Q8TAD8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.84■■□□□ 1.25
SNIP1Q8TAD8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
SNIP1Q8TAD8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.84■■□□□ 1.25
SNIP1Q8TAD8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.84■■□□□ 1.25
SNIP1Q8TAD8 AC005837.3-201ENST00000612163 286 ntBASIC22.84■■□□□ 1.25
SNIP1Q8TAD8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SNIP1Q8TAD8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SNIP1Q8TAD8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
SNIP1Q8TAD8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SNIP1Q8TAD8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.83■■□□□ 1.25
SNIP1Q8TAD8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SNIP1Q8TAD8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.83■■□□□ 1.24
SNIP1Q8TAD8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.82■■□□□ 1.24
SNIP1Q8TAD8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNIP1Q8TAD8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
SNIP1Q8TAD8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
SNIP1Q8TAD8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
SNIP1Q8TAD8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 AL117332.1-201ENST00000622628 974 ntBASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.81■■□□□ 1.24
SNIP1Q8TAD8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SNIP1Q8TAD8 AC120024.1-201ENST00000562672 995 ntBASIC22.8■■□□□ 1.24
SNIP1Q8TAD8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SNIP1Q8TAD8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 AC133561.4-201ENST00000566112 224 ntBASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 MIR3621-201ENST00000580529 85 ntBASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 AL139393.2-201ENST00000608721 2025 ntBASIC22.79■■□□□ 1.24
SNIP1Q8TAD8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNIP1Q8TAD8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SNIP1Q8TAD8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.78■■□□□ 1.24
SNIP1Q8TAD8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SNIP1Q8TAD8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.77■■□□□ 1.24
SNIP1Q8TAD8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
SNIP1Q8TAD8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.77■■□□□ 1.24
SNIP1Q8TAD8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SNIP1Q8TAD8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.76■■□□□ 1.23
SNIP1Q8TAD8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SNIP1Q8TAD8 AC096631.2-201ENST00000436136 790 ntBASIC22.76■■□□□ 1.23
SNIP1Q8TAD8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.76■■□□□ 1.23
SNIP1Q8TAD8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SNIP1Q8TAD8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.75■■□□□ 1.23
SNIP1Q8TAD8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNIP1Q8TAD8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 AC010997.5-201ENST00000609182 354 ntBASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 MIR6724-1-201ENST00000616420 92 ntBASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 MIR6724-2-201ENST00000616483 92 ntBASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 MIR6724-4-201ENST00000617390 92 ntBASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 MIR6724-3-201ENST00000622482 92 ntBASIC22.73■■□□□ 1.23
SNIP1Q8TAD8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SNIP1Q8TAD8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SNIP1Q8TAD8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.72■■□□□ 1.23
SNIP1Q8TAD8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
SNIP1Q8TAD8 AL356740.2-201ENST00000601559 647 ntBASIC22.71■■□□□ 1.23
SNIP1Q8TAD8 AC092666.2-201ENST00000613287 246 ntBASIC22.71■■□□□ 1.23
SNIP1Q8TAD8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.71■■□□□ 1.23
SNIP1Q8TAD8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.7■■□□□ 1.22
SNIP1Q8TAD8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.7■■□□□ 1.22
SNIP1Q8TAD8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SNIP1Q8TAD8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
SNIP1Q8TAD8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SNIP1Q8TAD8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms