Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM116Q8NCL8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM116Q8NCL8 MIR639-201ENST00000384974 98 ntBASIC18.87■□□□□ 0.61
TMEM116Q8NCL8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM116Q8NCL8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM116Q8NCL8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM116Q8NCL8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMEM116Q8NCL8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 AC022211.4-201ENST00000625094 2161 ntBASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM116Q8NCL8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 AC093323.1-202ENST00000635031 2045 ntBASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMEM116Q8NCL8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM116Q8NCL8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM116Q8NCL8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM116Q8NCL8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM116Q8NCL8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM116Q8NCL8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM116Q8NCL8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM116Q8NCL8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEM116Q8NCL8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM116Q8NCL8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM116Q8NCL8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM116Q8NCL8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM116Q8NCL8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM116Q8NCL8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM116Q8NCL8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM116Q8NCL8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms