Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKAIN3Q8N8D7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NKAIN3Q8N8D7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKAIN3Q8N8D7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 DUX4L11-201ENST00000611504 1267 ntBASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 DUX4L12-201ENST00000614593 1267 ntBASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 DUX4L14-201ENST00000621227 1267 ntBASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKAIN3Q8N8D7 AC097639.1-201ENST00000565519 1891 ntBASIC20.65■□□□□ 0.9
NKAIN3Q8N8D7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKAIN3Q8N8D7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NKAIN3Q8N8D7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NKAIN3Q8N8D7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
NKAIN3Q8N8D7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 AC126177.7-201ENST00000547904 679 ntBASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKAIN3Q8N8D7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.63■□□□□ 0.89
NKAIN3Q8N8D7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.62■□□□□ 0.89
NKAIN3Q8N8D7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 HLA-V-202ENST00000446817 847 ntBASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKAIN3Q8N8D7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKAIN3Q8N8D7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKAIN3Q8N8D7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NKAIN3Q8N8D7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKAIN3Q8N8D7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 LINC01124-201ENST00000409786 2117 ntBASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NKAIN3Q8N8D7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.58■□□□□ 0.89
NKAIN3Q8N8D7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKAIN3Q8N8D7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKAIN3Q8N8D7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms