Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.88■■■□□ 2.53
COL23A1Q86Y22 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
COL23A1Q86Y22 MIR3621-201ENST00000580529 85 ntBASIC30.88■■■□□ 2.53
COL23A1Q86Y22 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL23A1Q86Y22 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.88■■■□□ 2.53
COL23A1Q86Y22 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.87■■■□□ 2.53
COL23A1Q86Y22 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL23A1Q86Y22 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.86■■■□□ 2.53
COL23A1Q86Y22 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL23A1Q86Y22 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL23A1Q86Y22 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.86■■■□□ 2.53
COL23A1Q86Y22 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.86■■■□□ 2.53
COL23A1Q86Y22 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
COL23A1Q86Y22 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
COL23A1Q86Y22 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
COL23A1Q86Y22 MIR4466-201ENST00000606121 54 ntBASIC30.85■■■□□ 2.53
COL23A1Q86Y22 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL23A1Q86Y22 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL23A1Q86Y22 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL23A1Q86Y22 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL23A1Q86Y22 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
COL23A1Q86Y22 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL23A1Q86Y22 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL23A1Q86Y22 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
COL23A1Q86Y22 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.82■■■□□ 2.52
COL23A1Q86Y22 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL23A1Q86Y22 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.82■■■□□ 2.52
COL23A1Q86Y22 KRT18P10-201ENST00000388836 1287 ntBASIC30.81■■■□□ 2.52
COL23A1Q86Y22 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.81■■■□□ 2.52
COL23A1Q86Y22 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.81■■■□□ 2.52
COL23A1Q86Y22 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL23A1Q86Y22 AC010997.5-201ENST00000609182 354 ntBASIC30.81■■■□□ 2.52
COL23A1Q86Y22 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
COL23A1Q86Y22 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL23A1Q86Y22 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
COL23A1Q86Y22 AC133561.4-201ENST00000566112 224 ntBASIC30.8■■■□□ 2.52
COL23A1Q86Y22 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.8■■■□□ 2.52
COL23A1Q86Y22 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL23A1Q86Y22 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL23A1Q86Y22 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
COL23A1Q86Y22 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
COL23A1Q86Y22 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
COL23A1Q86Y22 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
COL23A1Q86Y22 ZNRF2P3-201ENST00000424200 374 ntBASIC30.79■■■□□ 2.52
COL23A1Q86Y22 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL23A1Q86Y22 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.78■■■□□ 2.52
COL23A1Q86Y22 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL23A1Q86Y22 RARRES2P6-201ENST00000567333 442 ntBASIC30.78■■■□□ 2.52
COL23A1Q86Y22 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
COL23A1Q86Y22 MIR6724-1-201ENST00000616420 92 ntBASIC30.77■■■□□ 2.52
COL23A1Q86Y22 MIR6724-2-201ENST00000616483 92 ntBASIC30.77■■■□□ 2.52
COL23A1Q86Y22 MIR6724-4-201ENST00000617390 92 ntBASIC30.77■■■□□ 2.52
COL23A1Q86Y22 MIR6724-3-201ENST00000622482 92 ntBASIC30.77■■■□□ 2.52
COL23A1Q86Y22 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.77■■■□□ 2.52
COL23A1Q86Y22 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.76■■■□□ 2.52
COL23A1Q86Y22 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.76■■■□□ 2.51
COL23A1Q86Y22 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.76■■■□□ 2.51
COL23A1Q86Y22 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL23A1Q86Y22 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL23A1Q86Y22 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.75■■■□□ 2.51
COL23A1Q86Y22 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
COL23A1Q86Y22 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
COL23A1Q86Y22 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.75■■■□□ 2.51
COL23A1Q86Y22 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL23A1Q86Y22 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.74■■■□□ 2.51
COL23A1Q86Y22 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
COL23A1Q86Y22 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.74■■■□□ 2.51
COL23A1Q86Y22 MIR4281-201ENST00000580852 62 ntBASIC30.74■■■□□ 2.51
COL23A1Q86Y22 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
COL23A1Q86Y22 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.73■■■□□ 2.51
COL23A1Q86Y22 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.73■■■□□ 2.51
COL23A1Q86Y22 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.73■■■□□ 2.51
COL23A1Q86Y22 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 AL356740.2-201ENST00000601559 647 ntBASIC30.72■■■□□ 2.51
COL23A1Q86Y22 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
COL23A1Q86Y22 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
COL23A1Q86Y22 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.71■■■□□ 2.51
COL23A1Q86Y22 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.71■■■□□ 2.51
COL23A1Q86Y22 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
COL23A1Q86Y22 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.7■■■□□ 2.51
COL23A1Q86Y22 AC026271.2-201ENST00000428091 497 ntBASIC30.7■■■□□ 2.51
COL23A1Q86Y22 AL512631.2-201ENST00000604634 923 ntBASIC30.7■■■□□ 2.51
COL23A1Q86Y22 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
COL23A1Q86Y22 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
COL23A1Q86Y22 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.68■■■□□ 2.5
COL23A1Q86Y22 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.68■■■□□ 2.5
COL23A1Q86Y22 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.68■■■□□ 2.5
COL23A1Q86Y22 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
COL23A1Q86Y22 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL23A1Q86Y22 MTDHP2-201ENST00000601468 714 ntBASIC30.67■■■□□ 2.5
COL23A1Q86Y22 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.67■■■□□ 2.5
COL23A1Q86Y22 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL23A1Q86Y22 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL23A1Q86Y22 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.66■■■□□ 2.5
COL23A1Q86Y22 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms