Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 AC020928.2-201ENST00000588717 2197 ntBASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.47■■□□□ 1.03
LRFN4Q6PJG9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN4Q6PJG9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN4Q6PJG9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.46■■□□□ 1.03
LRFN4Q6PJG9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN4Q6PJG9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LRFN4Q6PJG9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN4Q6PJG9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
LRFN4Q6PJG9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.45■■□□□ 1.03
LRFN4Q6PJG9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
LRFN4Q6PJG9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.45■■□□□ 1.02
LRFN4Q6PJG9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 MIR3960-201ENST00000583311 91 ntBASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN4Q6PJG9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN4Q6PJG9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LRFN4Q6PJG9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN4Q6PJG9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRFN4Q6PJG9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.42■■□□□ 1.02
LRFN4Q6PJG9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 AC010501.1-201ENST00000606270 1962 ntBASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 RNF126P1-201ENST00000567452 1320 ntBASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LRFN4Q6PJG9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRFN4Q6PJG9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LRFN4Q6PJG9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
LRFN4Q6PJG9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.39■■□□□ 1.02
LRFN4Q6PJG9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LRFN4Q6PJG9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.39■■□□□ 1.01
LRFN4Q6PJG9 RP9P-202ENST00000450133 1212 ntBASIC21.39■■□□□ 1.01
LRFN4Q6PJG9 AC007029.1-201ENST00000604183 313 ntBASIC21.39■■□□□ 1.01
LRFN4Q6PJG9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.39■■□□□ 1.01
LRFN4Q6PJG9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN4Q6PJG9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LRFN4Q6PJG9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN4Q6PJG9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN4Q6PJG9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN4Q6PJG9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRFN4Q6PJG9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
LRFN4Q6PJG9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LRFN4Q6PJG9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN4Q6PJG9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN4Q6PJG9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRFN4Q6PJG9 AC093536.1-201ENST00000569153 554 ntBASIC21.36■■□□□ 1.01
LRFN4Q6PJG9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN4Q6PJG9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LRFN4Q6PJG9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms