Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.13■■□□□ 1.61
RNF43Q68DV7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF43Q68DV7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RNF43Q68DV7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF43Q68DV7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF43Q68DV7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RNF43Q68DV7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
RNF43Q68DV7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RNF43Q68DV7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF43Q68DV7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RNF43Q68DV7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.11■■□□□ 1.61
RNF43Q68DV7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.11■■□□□ 1.61
RNF43Q68DV7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF43Q68DV7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF43Q68DV7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF43Q68DV7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RNF43Q68DV7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF43Q68DV7 AL592295.1-201ENST00000400984 884 ntBASIC25.1■■□□□ 1.61
RNF43Q68DV7 DUX4L18-201ENST00000553347 1267 ntBASIC25.1■■□□□ 1.61
RNF43Q68DV7 AC019069.1-201ENST00000610008 1333 ntBASIC25.1■■□□□ 1.61
RNF43Q68DV7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF43Q68DV7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF43Q68DV7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.09■■□□□ 1.61
RNF43Q68DV7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF43Q68DV7 SPCS2P3-201ENST00000500401 656 ntBASIC25.09■■□□□ 1.61
RNF43Q68DV7 AL451085.2-201ENST00000605085 799 ntBASIC25.09■■□□□ 1.61
RNF43Q68DV7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RNF43Q68DV7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF43Q68DV7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF43Q68DV7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RNF43Q68DV7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
RNF43Q68DV7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF43Q68DV7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF43Q68DV7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF43Q68DV7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
RNF43Q68DV7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF43Q68DV7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RNF43Q68DV7 AC142472.1-201ENST00000612013 1741 ntBASIC25.08■■□□□ 1.61
RNF43Q68DV7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
RNF43Q68DV7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF43Q68DV7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF43Q68DV7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.07■■□□□ 1.6
RNF43Q68DV7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF43Q68DV7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF43Q68DV7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF43Q68DV7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.06■■□□□ 1.6
RNF43Q68DV7 DUX4L9-201ENST00000449051 1259 ntBASIC25.06■■□□□ 1.6
RNF43Q68DV7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF43Q68DV7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
RNF43Q68DV7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
RNF43Q68DV7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF43Q68DV7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF43Q68DV7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF43Q68DV7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.05■■□□□ 1.6
RNF43Q68DV7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF43Q68DV7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF43Q68DV7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF43Q68DV7 AC145676.1-201ENST00000514988 2004 ntBASIC25.05■■□□□ 1.6
RNF43Q68DV7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF43Q68DV7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF43Q68DV7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF43Q68DV7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF43Q68DV7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.04■■□□□ 1.6
RNF43Q68DV7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF43Q68DV7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF43Q68DV7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF43Q68DV7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF43Q68DV7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF43Q68DV7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
RNF43Q68DV7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF43Q68DV7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF43Q68DV7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF43Q68DV7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RNF43Q68DV7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.02■■□□□ 1.6
RNF43Q68DV7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF43Q68DV7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF43Q68DV7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
RNF43Q68DV7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF43Q68DV7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF43Q68DV7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.01■■□□□ 1.59
RNF43Q68DV7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF43Q68DV7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF43Q68DV7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 AC093323.1-202ENST00000635031 2045 ntBASIC25■■□□□ 1.59
RNF43Q68DV7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25■■□□□ 1.59
RNF43Q68DV7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF43Q68DV7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF43Q68DV7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF43Q68DV7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF43Q68DV7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF43Q68DV7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF43Q68DV7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF43Q68DV7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF43Q68DV7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms