Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
SPHKAPQ2M3C7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC35.22■■■■□ 3.23
SPHKAPQ2M3C7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC35.22■■■■□ 3.23
SPHKAPQ2M3C7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
SPHKAPQ2M3C7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC35.22■■■■□ 3.23
SPHKAPQ2M3C7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC35.22■■■■□ 3.23
SPHKAPQ2M3C7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC35.21■■■■□ 3.23
SPHKAPQ2M3C7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
SPHKAPQ2M3C7 AC022616.5-201ENST00000518796 181 ntBASIC35.21■■■■□ 3.23
SPHKAPQ2M3C7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
SPHKAPQ2M3C7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
SPHKAPQ2M3C7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
SPHKAPQ2M3C7 AL592295.1-201ENST00000400984 884 ntBASIC35.2■■■■□ 3.23
SPHKAPQ2M3C7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
SPHKAPQ2M3C7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
SPHKAPQ2M3C7 KRT18P10-201ENST00000388836 1287 ntBASIC35.19■■■■□ 3.22
SPHKAPQ2M3C7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC35.19■■■■□ 3.22
SPHKAPQ2M3C7 THA1P-201ENST00000590384 1145 ntBASIC35.19■■■■□ 3.22
SPHKAPQ2M3C7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
SPHKAPQ2M3C7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
SPHKAPQ2M3C7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
SPHKAPQ2M3C7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
SPHKAPQ2M3C7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
SPHKAPQ2M3C7 AL356441.2-201ENST00000443009 864 ntBASIC35.17■■■■□ 3.22
SPHKAPQ2M3C7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.17■■■■□ 3.22
SPHKAPQ2M3C7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
SPHKAPQ2M3C7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC35.16■■■■□ 3.22
SPHKAPQ2M3C7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC35.16■■■■□ 3.22
SPHKAPQ2M3C7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.16■■■■□ 3.22
SPHKAPQ2M3C7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC35.15■■■■□ 3.22
SPHKAPQ2M3C7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC35.15■■■■□ 3.22
SPHKAPQ2M3C7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC35.15■■■■□ 3.22
SPHKAPQ2M3C7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC35.15■■■■□ 3.22
SPHKAPQ2M3C7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC35.14■■■■□ 3.22
SPHKAPQ2M3C7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
SPHKAPQ2M3C7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
SPHKAPQ2M3C7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC35.13■■■■□ 3.21
SPHKAPQ2M3C7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC35.13■■■■□ 3.21
SPHKAPQ2M3C7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC35.13■■■■□ 3.21
SPHKAPQ2M3C7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC35.12■■■■□ 3.21
SPHKAPQ2M3C7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC35.12■■■■□ 3.21
SPHKAPQ2M3C7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC35.12■■■■□ 3.21
SPHKAPQ2M3C7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC35.12■■■■□ 3.21
SPHKAPQ2M3C7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC35.12■■■■□ 3.21
SPHKAPQ2M3C7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 AP004609.3-201ENST00000610705 1884 ntBASIC35.11■■■■□ 3.21
SPHKAPQ2M3C7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC35.1■■■■□ 3.21
SPHKAPQ2M3C7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
SPHKAPQ2M3C7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
SPHKAPQ2M3C7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
SPHKAPQ2M3C7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
SPHKAPQ2M3C7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
SPHKAPQ2M3C7 BX664725.1-201ENST00000438252 379 ntBASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 AC239859.2-201ENST00000444165 318 ntBASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 AC019069.1-201ENST00000610008 1333 ntBASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC35.09■■■■□ 3.21
SPHKAPQ2M3C7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
SPHKAPQ2M3C7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC35.08■■■■□ 3.21
SPHKAPQ2M3C7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC35.08■■■■□ 3.21
SPHKAPQ2M3C7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC35.07■■■■□ 3.2
SPHKAPQ2M3C7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC35.07■■■■□ 3.2
SPHKAPQ2M3C7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC35.07■■■■□ 3.2
SPHKAPQ2M3C7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC35.07■■■■□ 3.2
SPHKAPQ2M3C7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC35.06■■■■□ 3.2
SPHKAPQ2M3C7 MIR4281-201ENST00000580852 62 ntBASIC35.06■■■■□ 3.2
SPHKAPQ2M3C7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
SPHKAPQ2M3C7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC35.06■■■■□ 3.2
SPHKAPQ2M3C7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
SPHKAPQ2M3C7 AC142086.6-201ENST00000621154 1765 ntBASIC35.05■■■■□ 3.2
SPHKAPQ2M3C7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC35.05■■■■□ 3.2
SPHKAPQ2M3C7 GRAMD4P7-201ENST00000578182 1232 ntBASIC35.05■■■■□ 3.2
SPHKAPQ2M3C7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
SPHKAPQ2M3C7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC35.04■■■■□ 3.2
SPHKAPQ2M3C7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC35.03■■■■□ 3.2
SPHKAPQ2M3C7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
SPHKAPQ2M3C7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
SPHKAPQ2M3C7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC35.03■■■■□ 3.2
SPHKAPQ2M3C7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC35.03■■■■□ 3.2
SPHKAPQ2M3C7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 UNC93B8-201ENST00000511903 705 ntBASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SPHKAPQ2M3C7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
SPHKAPQ2M3C7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms