Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 NHA1YLR138W 2958 nt6.33□□□□□ -1.4
YNL040WP53960 PGK1YCR012W 1251 nt6.33□□□□□ -1.4
YNL040WP53960 YMR119W-AYMR119W-A 375 nt6.33□□□□□ -1.4
YNL040WP53960 YNL097W-AYNL097W-A 156 nt6.33□□□□□ -1.4
YNL040WP53960 YPR123CYPR123C 435 nt6.33□□□□□ -1.4
YNL040WP53960 FRE5YOR384W 2085 nt6.33□□□□□ -1.4
YNL040WP53960 SSK22YCR073C 3996 nt6.33□□□□□ -1.4
YNL040WP53960 MTC5YDR128W 3447 nt6.32□□□□□ -1.4
YNL040WP53960 snR82snR82 268 nt6.32□□□□□ -1.4
YNL040WP53960 YDL218WYDL218W 954 nt6.32□□□□□ -1.4
YNL040WP53960 LDS1YAL018C 978 nt6.32□□□□□ -1.4
YNL040WP53960 MRPS12YNR036C 462 nt6.32□□□□□ -1.4
YNL040WP53960 ICL1YER065C 1674 nt6.32□□□□□ -1.4
YNL040WP53960 PET112YBL080C 1626 nt6.32□□□□□ -1.4
YNL040WP53960 YFL042CYFL042C 2025 nt6.32□□□□□ -1.4
YNL040WP53960 ATG22YCL038C 1587 nt6.31□□□□□ -1.4
YNL040WP53960 CDC34YDR054C 888 nt6.31□□□□□ -1.4
YNL040WP53960 YLR157W-EYLR157W-E 165 nt6.31□□□□□ -1.4
YNL040WP53960 CAF40YNL288W 1122 nt6.31□□□□□ -1.4
YNL040WP53960 ASN2YGR124W 1719 nt6.3□□□□□ -1.4
YNL040WP53960 MDM31YHR194W 1740 nt6.3□□□□□ -1.4
YNL040WP53960 VPS4YPR173C 1314 nt6.3□□□□□ -1.4
YNL040WP53960 PAT1YCR077C 2391 nt6.3□□□□□ -1.4
YNL040WP53960 GUD1YDL238C 1470 nt6.3□□□□□ -1.4
YNL040WP53960 YOS9YDR057W 1629 nt6.3□□□□□ -1.4
YNL040WP53960 JNM1YMR294W 1122 nt6.3□□□□□ -1.4
YNL040WP53960 TEP1YNL128W 1305 nt6.29□□□□□ -1.4
YNL040WP53960 YEL068CYEL068C 333 nt6.29□□□□□ -1.4
YNL040WP53960 DOT5YIL010W 648 nt6.29□□□□□ -1.4
YNL040WP53960 TSA1YML028W 591 nt6.29□□□□□ -1.4
YNL040WP53960 RPS28AYOR167C 204 nt6.29□□□□□ -1.4
YNL040WP53960 MRPS16YPL013C 366 nt6.29□□□□□ -1.4
YNL040WP53960 KTR5YNL029C 1569 nt6.28□□□□□ -1.4
YNL040WP53960 BCY1YIL033C 1251 nt6.28□□□□□ -1.4
YNL040WP53960 TIM22YDL217C 624 nt6.27□□□□□ -1.41
YNL040WP53960 YDR034W-BYDR034W-B 156 nt6.27□□□□□ -1.41
YNL040WP53960 tR(ACG)DtR(ACG)D 73 nt6.27□□□□□ -1.41
YNL040WP53960 tR(ACG)EtR(ACG)E 73 nt6.27□□□□□ -1.41
YNL040WP53960 tR(ACG)KtR(ACG)K 73 nt6.27□□□□□ -1.41
YNL040WP53960 tR(ACG)LtR(ACG)L 73 nt6.27□□□□□ -1.41
YNL040WP53960 tR(ACG)OtR(ACG)O 73 nt6.27□□□□□ -1.41
YNL040WP53960 MED6YHR058C 888 nt6.27□□□□□ -1.41
YNL040WP53960 RPS5YJR123W 678 nt6.27□□□□□ -1.41
YNL040WP53960 VMA4YOR332W 702 nt6.27□□□□□ -1.41
YNL040WP53960 SKI2YLR398C 3864 nt6.27□□□□□ -1.41
YNL040WP53960 HST3YOR025W 1344 nt6.26□□□□□ -1.41
YNL040WP53960 MNN5YJL186W 1761 nt6.26□□□□□ -1.41
YNL040WP53960 HAS1YMR290C 1518 nt6.26□□□□□ -1.41
YNL040WP53960 YOL163WYOL163W 510 nt6.26□□□□□ -1.41
YNL040WP53960 NME1NME1 340 nt6.26□□□□□ -1.41
YNL040WP53960 YPR114WYPR114W 948 nt6.26□□□□□ -1.41
YNL040WP53960 PDR18YNR070W 4002 nt6.26□□□□□ -1.41
YNL040WP53960 PKC1YBL105C 3456 nt6.25□□□□□ -1.41
YNL040WP53960 RPT3YDR394W 1287 nt6.25□□□□□ -1.41
YNL040WP53960 MRS1YIR021W 1092 nt6.25□□□□□ -1.41
YNL040WP53960 KKQ8YKL168C 2175 nt6.25□□□□□ -1.41
YNL040WP53960 UTP4YDR324C 2331 nt6.25□□□□□ -1.41
YNL040WP53960 CLB2YPR119W 1476 nt6.24□□□□□ -1.41
YNL040WP53960 ERP2YAL007C 648 nt6.24□□□□□ -1.41
YNL040WP53960 RPE1YJL121C 717 nt6.24□□□□□ -1.41
YNL040WP53960 MOG1YJR074W 657 nt6.24□□□□□ -1.41
YNL040WP53960 ZRT2YLR130C 1269 nt6.24□□□□□ -1.41
YNL040WP53960 YHM2YMR241W 945 nt6.24□□□□□ -1.41
YNL040WP53960 GLN1YPR035W 1113 nt6.24□□□□□ -1.41
YNL040WP53960 YEN1YER041W 2280 nt6.24□□□□□ -1.41
YNL040WP53960 IVY1YDR229W 1362 nt6.23□□□□□ -1.41
YNL040WP53960 RPL7AYGL076C 735 nt6.23□□□□□ -1.41
YNL040WP53960 PRE3YJL001W 648 nt6.23□□□□□ -1.41
YNL040WP53960 RPL7BYPL198W 735 nt6.23□□□□□ -1.41
YNL040WP53960 POP1YNL221C 2628 nt6.23□□□□□ -1.41
YNL040WP53960 VHT1YGR065C 1782 nt6.22□□□□□ -1.41
YNL040WP53960 BUD32YGR262C 786 nt6.22□□□□□ -1.41
YNL040WP53960 GCV3YAL044C 513 nt6.22□□□□□ -1.41
YNL040WP53960 NHP6BYBR089C-A 300 nt6.22□□□□□ -1.41
YNL040WP53960 DAL7YIR031C 1665 nt6.22□□□□□ -1.41
YNL040WP53960 GYP8YFL027C 1494 nt6.22□□□□□ -1.41
YNL040WP53960 HAP3YBL021C 435 nt6.21□□□□□ -1.42
YNL040WP53960 YNL042W-BYNL042W-B 258 nt6.21□□□□□ -1.42
YNL040WP53960 CLB1YGR108W 1416 nt6.21□□□□□ -1.42
YNL040WP53960 KEX2YNL238W 2445 nt6.21□□□□□ -1.42
YNL040WP53960 PTK2YJR059W 2457 nt6.21□□□□□ -1.42
YNL040WP53960 SKS1YPL026C 1509 nt6.2□□□□□ -1.42
YNL040WP53960 YDL129WYDL129W 876 nt6.2□□□□□ -1.42
YNL040WP53960 YPR160C-AYPR160C-A 285 nt6.2□□□□□ -1.42
YNL040WP53960 DAL4YIR028W 1908 nt6.2□□□□□ -1.42
YNL040WP53960 ATG4YNL223W 1485 nt6.2□□□□□ -1.42
YNL040WP53960 RAD24YER173W 1980 nt6.2□□□□□ -1.42
YNL040WP53960 FRS2YFL022C 1512 nt6.2□□□□□ -1.42
YNL040WP53960 AMA1YGR225W 1782 nt6.19□□□□□ -1.42
YNL040WP53960 MET8YBR213W 825 nt6.19□□□□□ -1.42
YNL040WP53960 LYS21YDL131W 1323 nt6.19□□□□□ -1.42
YNL040WP53960 YGR127WYGR127W 939 nt6.18□□□□□ -1.42
YNL040WP53960 PHB1YGR132C 864 nt6.18□□□□□ -1.42
YNL040WP53960 GAT1YFL021W 1533 nt6.17□□□□□ -1.42
YNL040WP53960 RPN11YFR004W 921 nt6.17□□□□□ -1.42
YNL040WP53960 LEU5YHR002W 1074 nt6.17□□□□□ -1.42
YNL040WP53960 IFA38YBR159W 1044 nt6.17□□□□□ -1.42
YNL040WP53960 MCM3YEL032W 2916 nt6.16□□□□□ -1.42
YNL040WP53960 CIN4YMR138W 576 nt6.16□□□□□ -1.42
YNL040WP53960 GPB2YAL056W 2643 nt6.16□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms