Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 CRH1YGR189C 1524 nt5.33□□□□□ -1.56
NIF3P53081 YFL042CYFL042C 2025 nt5.33□□□□□ -1.56
NIF3P53081 LAT1YNL071W 1449 nt5.33□□□□□ -1.56
NIF3P53081 SAC6YDR129C 1929 nt5.33□□□□□ -1.56
NIF3P53081 BZZ1YHR114W 1902 nt5.33□□□□□ -1.56
NIF3P53081 SKN1YGR143W 2316 nt5.33□□□□□ -1.56
NIF3P53081 YIL077CYIL077C 963 nt5.33□□□□□ -1.56
NIF3P53081 GTO3YMR251W 1101 nt5.33□□□□□ -1.56
NIF3P53081 LSC1YOR142W 990 nt5.33□□□□□ -1.56
NIF3P53081 VMA4YOR332W 702 nt5.33□□□□□ -1.56
NIF3P53081 GLN1YPR035W 1113 nt5.33□□□□□ -1.56
NIF3P53081 QNS1YHR074W 2145 nt5.33□□□□□ -1.56
NIF3P53081 SET5YHR207C 1581 nt5.33□□□□□ -1.56
NIF3P53081 SUB2YDL084W 1341 nt5.32□□□□□ -1.56
NIF3P53081 SOH1YGL127C 384 nt5.32□□□□□ -1.56
NIF3P53081 YMR119W-AYMR119W-A 375 nt5.32□□□□□ -1.56
NIF3P53081 IFA38YBR159W 1044 nt5.32□□□□□ -1.56
NIF3P53081 SIT1YEL065W 1887 nt5.32□□□□□ -1.56
NIF3P53081 LSG1YGL099W 1923 nt5.31□□□□□ -1.56
NIF3P53081 RPT3YDR394W 1287 nt5.31□□□□□ -1.56
NIF3P53081 ILV1YER086W 1731 nt5.31□□□□□ -1.56
NIF3P53081 SSK1YLR006C 2139 nt5.3□□□□□ -1.56
NIF3P53081 TEL2YGR099W 2067 nt5.3□□□□□ -1.56
NIF3P53081 RPL7AYGL076C 735 nt5.3□□□□□ -1.56
NIF3P53081 NCS6YGL211W 1080 nt5.3□□□□□ -1.56
NIF3P53081 ASF1YJL115W 840 nt5.3□□□□□ -1.56
NIF3P53081 RPL7BYPL198W 735 nt5.3□□□□□ -1.56
NIF3P53081 NHP6BYBR089C-A 300 nt5.3□□□□□ -1.56
NIF3P53081 PTC3YBL056W 1407 nt5.3□□□□□ -1.56
NIF3P53081 YCK1YHR135C 1617 nt5.3□□□□□ -1.56
NIF3P53081 ATG7YHR171W 1893 nt5.29□□□□□ -1.56
NIF3P53081 GUD1YDL238C 1470 nt5.29□□□□□ -1.56
NIF3P53081 BUG1YDL099W 1026 nt5.29□□□□□ -1.56
NIF3P53081 FMO1YHR176W 1299 nt5.29□□□□□ -1.56
NIF3P53081 RPE1YJL121C 717 nt5.29□□□□□ -1.56
NIF3P53081 PYC2YBR218C 3543 nt5.29□□□□□ -1.56
NIF3P53081 PTK2YJR059W 2457 nt5.28□□□□□ -1.56
NIF3P53081 HOC1YJR075W 1191 nt5.28□□□□□ -1.56
NIF3P53081 LDB7YBL006C 543 nt5.28□□□□□ -1.56
NIF3P53081 RPS3YNL178W 723 nt5.28□□□□□ -1.56
NIF3P53081 LGE1YPL055C 999 nt5.28□□□□□ -1.56
NIF3P53081 AMA1YGR225W 1782 nt5.28□□□□□ -1.56
NIF3P53081 FAT3YKL187C 2253 nt5.28□□□□□ -1.56
NIF3P53081 KEX2YNL238W 2445 nt5.28□□□□□ -1.56
NIF3P53081 GEX1YCL073C 1848 nt5.27□□□□□ -1.57
NIF3P53081 YMR155WYMR155W 1644 nt5.27□□□□□ -1.57
NIF3P53081 UTP9YHR196W 1728 nt5.27□□□□□ -1.57
NIF3P53081 HSP150YJL159W 1242 nt5.27□□□□□ -1.57
NIF3P53081 LIA1YJR070C 978 nt5.27□□□□□ -1.57
NIF3P53081 PDR18YNR070W 4002 nt5.27□□□□□ -1.57
NIF3P53081 MCH1YDL054C 1461 nt5.26□□□□□ -1.57
NIF3P53081 GPD2YOL059W 1323 nt5.26□□□□□ -1.57
NIF3P53081 EIS1YMR031C 2532 nt5.26□□□□□ -1.57
NIF3P53081 GUP2YPL189W 1830 nt5.26□□□□□ -1.57
NIF3P53081 RPR1RPR1 369 nt5.26□□□□□ -1.57
NIF3P53081 GAT1YFL021W 1533 nt5.26□□□□□ -1.57
NIF3P53081 ALD6YPL061W 1503 nt5.25□□□□□ -1.57
NIF3P53081 LCL3YGL085W 825 nt5.25□□□□□ -1.57
NIF3P53081 MED6YHR058C 888 nt5.25□□□□□ -1.57
NIF3P53081 RMA1YKL132C 1293 nt5.25□□□□□ -1.57
NIF3P53081 RPL10YLR075W 666 nt5.25□□□□□ -1.57
NIF3P53081 FPR3YML074C 1236 nt5.25□□□□□ -1.57
NIF3P53081 SPE3YPR069C 882 nt5.25□□□□□ -1.57
NIF3P53081 CLB1YGR108W 1416 nt5.24□□□□□ -1.57
NIF3P53081 BIO3YNR058W 1443 nt5.24□□□□□ -1.57
NIF3P53081 KKQ8YKL168C 2175 nt5.24□□□□□ -1.57
NIF3P53081 BCY1YIL033C 1251 nt5.24□□□□□ -1.57
NIF3P53081 SUP2tY(GUA)D 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP11tY(GUA)F1 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP6tY(GUA)F2 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP7tY(GUA)J1 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP4tY(GUA)J2 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP5tY(GUA)M1 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP8tY(GUA)M2 75 nt5.24□□□□□ -1.57
NIF3P53081 SUP3tY(GUA)O 75 nt5.24□□□□□ -1.57
NIF3P53081 TAF9YMR236W 474 nt5.24□□□□□ -1.57
NIF3P53081 BNA5YLR231C 1362 nt5.24□□□□□ -1.57
NIF3P53081 HST3YOR025W 1344 nt5.23□□□□□ -1.57
NIF3P53081 MRPL35YDR322W 1104 nt5.23□□□□□ -1.57
NIF3P53081 RPN11YFR004W 921 nt5.23□□□□□ -1.57
NIF3P53081 YKR045CYKR045C 552 nt5.23□□□□□ -1.57
NIF3P53081 MCP1YOR228C 909 nt5.23□□□□□ -1.57
NIF3P53081 CWC27YPL064C 906 nt5.23□□□□□ -1.57
NIF3P53081 GEX2YKR106W 1848 nt5.23□□□□□ -1.57
NIF3P53081 FRS2YFL022C 1512 nt5.23□□□□□ -1.57
NIF3P53081 STE13YOR219C 2796 nt5.22□□□□□ -1.57
NIF3P53081 WHI2YOR043W 1461 nt5.22□□□□□ -1.57
NIF3P53081 GPD1YDL022W 1176 nt5.22□□□□□ -1.57
NIF3P53081 MHT1YLL062C 975 nt5.22□□□□□ -1.57
NIF3P53081 PRE5YMR314W 705 nt5.22□□□□□ -1.57
NIF3P53081 SSK22YCR073C 3996 nt5.22□□□□□ -1.57
NIF3P53081 YJR084WYJR084W 1272 nt5.21□□□□□ -1.58
NIF3P53081 RRS1YOR294W 612 nt5.21□□□□□ -1.58
NIF3P53081 VPS72YDR485C 2388 nt5.2□□□□□ -1.58
NIF3P53081 YMR279CYMR279C 1623 nt5.2□□□□□ -1.58
NIF3P53081 NOP2YNL061W 1857 nt5.2□□□□□ -1.58
NIF3P53081 TIM22YDL217C 624 nt5.2□□□□□ -1.58
NIF3P53081 tR(ACG)DtR(ACG)D 73 nt5.2□□□□□ -1.58
NIF3P53081 tR(ACG)EtR(ACG)E 73 nt5.2□□□□□ -1.58
NIF3P53081 tR(ACG)KtR(ACG)K 73 nt5.2□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms