Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 GPX1-201ENST00000419349 1106 ntBASIC22.06■■□□□ 1.12
SLC1A3P43003 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC1A3P43003 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC1A3P43003 MIR3960-201ENST00000583311 91 ntBASIC22.06■■□□□ 1.12
SLC1A3P43003 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC1A3P43003 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC1A3P43003 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC1A3P43003 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC1A3P43003 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC1A3P43003 AC010501.1-201ENST00000606270 1962 ntBASIC22.05■■□□□ 1.12
SLC1A3P43003 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC1A3P43003 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC1A3P43003 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC1A3P43003 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC1A3P43003 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC1A3P43003 ERN1-208ENST00000606895 2068 ntBASIC22.04■■□□□ 1.12
SLC1A3P43003 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC1A3P43003 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC1A3P43003 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC1A3P43003 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SLC1A3P43003 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC1A3P43003 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC1A3P43003 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SLC1A3P43003 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC1A3P43003 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC1A3P43003 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.02■■□□□ 1.12
SLC1A3P43003 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.02■■□□□ 1.12
SLC1A3P43003 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC1A3P43003 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC1A3P43003 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.02■■□□□ 1.12
SLC1A3P43003 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC1A3P43003 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.02■■□□□ 1.11
SLC1A3P43003 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
SLC1A3P43003 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC1A3P43003 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC1A3P43003 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC1A3P43003 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SLC1A3P43003 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
SLC1A3P43003 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC1A3P43003 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC1A3P43003 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SLC1A3P43003 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC1A3P43003 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLC1A3P43003 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22■■□□□ 1.11
SLC1A3P43003 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22■■□□□ 1.11
SLC1A3P43003 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22■■□□□ 1.11
SLC1A3P43003 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLC1A3P43003 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC1A3P43003 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.99■■□□□ 1.11
SLC1A3P43003 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC1A3P43003 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC1A3P43003 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC1A3P43003 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC1A3P43003 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC1A3P43003 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SLC1A3P43003 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC1A3P43003 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC1A3P43003 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SLC1A3P43003 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC1A3P43003 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.97■■□□□ 1.11
SLC1A3P43003 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC1A3P43003 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC1A3P43003 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC1A3P43003 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC1A3P43003 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC1A3P43003 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SLC1A3P43003 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC1A3P43003 RP9P-202ENST00000450133 1212 ntBASIC21.95■■□□□ 1.1
SLC1A3P43003 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC1A3P43003 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC1A3P43003 AC007029.1-201ENST00000604183 313 ntBASIC21.95■■□□□ 1.1
SLC1A3P43003 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
SLC1A3P43003 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SLC1A3P43003 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC1A3P43003 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.94■■□□□ 1.1
SLC1A3P43003 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A3P43003 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A3P43003 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A3P43003 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.93■■□□□ 1.1
SLC1A3P43003 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
SLC1A3P43003 RNF126P1-201ENST00000567452 1320 ntBASIC21.93■■□□□ 1.1
SLC1A3P43003 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SLC1A3P43003 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SLC1A3P43003 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC1A3P43003 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC1A3P43003 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC1A3P43003 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SLC1A3P43003 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A3P43003 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SLC1A3P43003 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A3P43003 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC1A3P43003 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A3P43003 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC1A3P43003 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC1A3P43003 AC096887.2-201ENST00000623443 1957 ntBASIC21.92■■□□□ 1.1
SLC1A3P43003 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A3P43003 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SLC1A3P43003 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SLC1A3P43003 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A3P43003 AC093536.1-201ENST00000569153 554 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms