Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CEACAM3P40198 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CEACAM3P40198 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.55■□□□□ 0.72
CEACAM3P40198 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CEACAM3P40198 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.54■□□□□ 0.72
CEACAM3P40198 U85056.1-201ENST00000616429 682 ntBASIC19.54■□□□□ 0.72
CEACAM3P40198 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CEACAM3P40198 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.54■□□□□ 0.72
CEACAM3P40198 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CEACAM3P40198 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEACAM3P40198 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CEACAM3P40198 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEACAM3P40198 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
CEACAM3P40198 AL592293.1-201ENST00000502889 1188 ntBASIC19.53■□□□□ 0.72
CEACAM3P40198 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CEACAM3P40198 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.53■□□□□ 0.72
CEACAM3P40198 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CEACAM3P40198 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CEACAM3P40198 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.52■□□□□ 0.72
CEACAM3P40198 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.52■□□□□ 0.72
CEACAM3P40198 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CEACAM3P40198 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CEACAM3P40198 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CEACAM3P40198 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.51■□□□□ 0.71
CEACAM3P40198 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.51■□□□□ 0.71
CEACAM3P40198 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.51■□□□□ 0.71
CEACAM3P40198 AC145676.1-201ENST00000514988 2004 ntBASIC19.51■□□□□ 0.71
CEACAM3P40198 AC018755.3-202ENST00000596210 929 ntBASIC19.51■□□□□ 0.71
CEACAM3P40198 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.51■□□□□ 0.71
CEACAM3P40198 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CEACAM3P40198 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CEACAM3P40198 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CEACAM3P40198 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CEACAM3P40198 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CEACAM3P40198 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CEACAM3P40198 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CEACAM3P40198 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CEACAM3P40198 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CEACAM3P40198 AC010501.1-201ENST00000606270 1962 ntBASIC19.49■□□□□ 0.71
CEACAM3P40198 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CEACAM3P40198 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CEACAM3P40198 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CEACAM3P40198 AC091060.1-201ENST00000623524 1766 ntBASIC19.48■□□□□ 0.71
CEACAM3P40198 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CEACAM3P40198 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CEACAM3P40198 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CEACAM3P40198 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CEACAM3P40198 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CEACAM3P40198 KRT18P60-201ENST00000312876 1297 ntBASIC19.47■□□□□ 0.71
CEACAM3P40198 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CEACAM3P40198 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CEACAM3P40198 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CEACAM3P40198 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CEACAM3P40198 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CEACAM3P40198 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CEACAM3P40198 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CEACAM3P40198 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CEACAM3P40198 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.46■□□□□ 0.71
CEACAM3P40198 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CEACAM3P40198 DUSP8P4-201ENST00000399538 1761 ntBASIC19.46■□□□□ 0.71
CEACAM3P40198 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEACAM3P40198 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEACAM3P40198 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEACAM3P40198 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.45■□□□□ 0.7
CEACAM3P40198 MIR6765-201ENST00000614092 87 ntBASIC19.45■□□□□ 0.7
CEACAM3P40198 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEACAM3P40198 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CEACAM3P40198 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEACAM3P40198 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.44■□□□□ 0.7
CEACAM3P40198 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.44■□□□□ 0.7
CEACAM3P40198 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.44■□□□□ 0.7
CEACAM3P40198 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CEACAM3P40198 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.44■□□□□ 0.7
CEACAM3P40198 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CEACAM3P40198 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.43■□□□□ 0.7
CEACAM3P40198 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CEACAM3P40198 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEACAM3P40198 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.43■□□□□ 0.7
CEACAM3P40198 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.43■□□□□ 0.7
CEACAM3P40198 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CEACAM3P40198 AC129492.7-201ENST00000622992 756 ntBASIC19.43■□□□□ 0.7
CEACAM3P40198 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEACAM3P40198 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CEACAM3P40198 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEACAM3P40198 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEACAM3P40198 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.42■□□□□ 0.7
CEACAM3P40198 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.42■□□□□ 0.7
CEACAM3P40198 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEACAM3P40198 ERN1-208ENST00000606895 2068 ntBASIC19.42■□□□□ 0.7
CEACAM3P40198 DUX4L9-201ENST00000449051 1259 ntBASIC19.42■□□□□ 0.7
CEACAM3P40198 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CEACAM3P40198 AC012354.3-201ENST00000623734 483 ntBASIC19.42■□□□□ 0.7
CEACAM3P40198 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.42■□□□□ 0.7
CEACAM3P40198 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms