Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 IRC7YFR055W 1023 nt7.55□□□□□ -1.2
RTR1P40084 MCM3YEL032W 2916 nt7.55□□□□□ -1.2
RTR1P40084 RGT2YDL138W 2292 nt7.54□□□□□ -1.2
RTR1P40084 CLN1YMR199W 1641 nt7.54□□□□□ -1.2
RTR1P40084 PGK1YCR012W 1251 nt7.54□□□□□ -1.2
RTR1P40084 DFM1YDR411C 1026 nt7.54□□□□□ -1.2
RTR1P40084 FPR2YDR519W 408 nt7.54□□□□□ -1.2
RTR1P40084 MRPS5YBR251W 924 nt7.54□□□□□ -1.2
RTR1P40084 COR1YBL045C 1374 nt7.54□□□□□ -1.2
RTR1P40084 MSB3YNL293W 1902 nt7.54□□□□□ -1.2
RTR1P40084 YHL017WYHL017W 1599 nt7.54□□□□□ -1.2
RTR1P40084 YDL022C-AYDL022C-A 249 nt7.53□□□□□ -1.2
RTR1P40084 UGX2YDL169C 672 nt7.53□□□□□ -1.2
RTR1P40084 YML012C-AYML012C-A 378 nt7.53□□□□□ -1.2
RTR1P40084 Q0010Q0010 387 nt7.53□□□□□ -1.2
RTR1P40084 EDC3YEL015W 1656 nt7.53□□□□□ -1.2
RTR1P40084 AFG1YEL052W 1530 nt7.52□□□□□ -1.2
RTR1P40084 SPO7YAL009W 780 nt7.52□□□□□ -1.21
RTR1P40084 YUR1YJL139C 1287 nt7.52□□□□□ -1.21
RTR1P40084 SEN34YAR008W 828 nt7.52□□□□□ -1.21
RTR1P40084 PXL1YKR090W 2121 nt7.52□□□□□ -1.21
RTR1P40084 ARA2YMR041C 1008 nt7.51□□□□□ -1.21
RTR1P40084 UBC11YOR339C 471 nt7.51□□□□□ -1.21
RTR1P40084 PDR18YNR070W 4002 nt7.5□□□□□ -1.21
RTR1P40084 EFM3YJR129C 1020 nt7.5□□□□□ -1.21
RTR1P40084 YOL163WYOL163W 510 nt7.5□□□□□ -1.21
RTR1P40084 ATG12YBR217W 561 nt7.5□□□□□ -1.21
RTR1P40084 CNE1YAL058W 1509 nt7.5□□□□□ -1.21
RTR1P40084 YOL036WYOL036W 2286 nt7.49□□□□□ -1.21
RTR1P40084 ISN1YOR155C 1353 nt7.49□□□□□ -1.21
RTR1P40084 SHP1YBL058W 1272 nt7.49□□□□□ -1.21
RTR1P40084 PRP24YMR268C 1335 nt7.49□□□□□ -1.21
RTR1P40084 MNN5YJL186W 1761 nt7.48□□□□□ -1.21
RTR1P40084 RPN11YFR004W 921 nt7.48□□□□□ -1.21
RTR1P40084 ISC1YER019W 1434 nt7.47□□□□□ -1.21
RTR1P40084 SUP19tS(UGA)E 82 nt7.47□□□□□ -1.21
RTR1P40084 SUP17tS(UGA)I 82 nt7.47□□□□□ -1.21
RTR1P40084 SUP16tS(UGA)P 82 nt7.47□□□□□ -1.21
RTR1P40084 IFA38YBR159W 1044 nt7.47□□□□□ -1.21
RTR1P40084 GIT1YCR098C 1557 nt7.46□□□□□ -1.21
RTR1P40084 APE3YBR286W 1614 nt7.46□□□□□ -1.21
RTR1P40084 STF1YDL130W-A 261 nt7.46□□□□□ -1.22
RTR1P40084 SUP2tY(GUA)D 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP11tY(GUA)F1 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP6tY(GUA)F2 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP7tY(GUA)J1 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP4tY(GUA)J2 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP5tY(GUA)M1 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP8tY(GUA)M2 75 nt7.46□□□□□ -1.22
RTR1P40084 SUP3tY(GUA)O 75 nt7.46□□□□□ -1.22
RTR1P40084 ASK1YKL052C 879 nt7.46□□□□□ -1.22
RTR1P40084 ICT1YLR099C 1185 nt7.46□□□□□ -1.22
RTR1P40084 YNR040WYNR040W 771 nt7.46□□□□□ -1.22
RTR1P40084 AGP2YBR132C 1791 nt7.46□□□□□ -1.22
RTR1P40084 ECM10YEL030W 1935 nt7.45□□□□□ -1.22
RTR1P40084 AAD15YOL165C 432 nt7.45□□□□□ -1.22
RTR1P40084 YPR123CYPR123C 435 nt7.45□□□□□ -1.22
RTR1P40084 YDR109CYDR109C 2148 nt7.45□□□□□ -1.22
RTR1P40084 FET4YMR319C 1659 nt7.44□□□□□ -1.22
RTR1P40084 DJP1YIR004W 1299 nt7.44□□□□□ -1.22
RTR1P40084 KNS1YLL019C 2214 nt7.44□□□□□ -1.22
RTR1P40084 RAD3YER171W 2337 nt7.44□□□□□ -1.22
RTR1P40084 MRK1YDL079C 1506 nt7.43□□□□□ -1.22
RTR1P40084 YJU3YKL094W 942 nt7.43□□□□□ -1.22
RTR1P40084 SNN1YNL086W 309 nt7.43□□□□□ -1.22
RTR1P40084 YBR144CYBR144C 315 nt7.43□□□□□ -1.22
RTR1P40084 PKC1YBL105C 3456 nt7.42□□□□□ -1.22
RTR1P40084 CIS3YJL158C 684 nt7.42□□□□□ -1.22
RTR1P40084 IMA5YJL216C 1746 nt7.41□□□□□ -1.22
RTR1P40084 MRS1YIR021W 1092 nt7.41□□□□□ -1.22
RTR1P40084 YDL144CYDL144C 1071 nt7.4□□□□□ -1.22
RTR1P40084 GUT1YHL032C 2130 nt7.39□□□□□ -1.23
RTR1P40084 HAP2YGL237C 798 nt7.39□□□□□ -1.23
RTR1P40084 RPE1YJL121C 717 nt7.39□□□□□ -1.23
RTR1P40084 RPS9AYPL081W 594 nt7.39□□□□□ -1.23
RTR1P40084 RRP4YHR069C 1080 nt7.38□□□□□ -1.23
RTR1P40084 EGD2YHR193C 525 nt7.38□□□□□ -1.23
RTR1P40084 YBR056C-BYBR056C-B 159 nt7.38□□□□□ -1.23
RTR1P40084 PUF3YLL013C 2640 nt7.37□□□□□ -1.23
RTR1P40084 XBP1YIL101C 1944 nt7.37□□□□□ -1.23
RTR1P40084 RME1YGR044C 903 nt7.37□□□□□ -1.23
RTR1P40084 SNO4YMR322C 714 nt7.37□□□□□ -1.23
RTR1P40084 HSP33YOR391C 714 nt7.37□□□□□ -1.23
RTR1P40084 HSP32YPL280W 714 nt7.37□□□□□ -1.23
RTR1P40084 VRP1YLR337C 2454 nt7.36□□□□□ -1.23
RTR1P40084 SEC20YDR498C 1152 nt7.36□□□□□ -1.23
RTR1P40084 YDL114WYDL114W 927 nt7.35□□□□□ -1.23
RTR1P40084 LYS12YIL094C 1116 nt7.35□□□□□ -1.23
RTR1P40084 DIA3YDL024C 1407 nt7.35□□□□□ -1.23
RTR1P40084 YHR131CYHR131C 2553 nt7.34□□□□□ -1.23
RTR1P40084 YPK2YMR104C 2034 nt7.34□□□□□ -1.23
RTR1P40084 GAT1YFL021W 1533 nt7.34□□□□□ -1.23
RTR1P40084 COX9YDL067C 180 nt7.34□□□□□ -1.23
RTR1P40084 ATO3YDR384C 828 nt7.34□□□□□ -1.23
RTR1P40084 VMA4YOR332W 702 nt7.34□□□□□ -1.23
RTR1P40084 SKI2YLR398C 3864 nt7.33□□□□□ -1.24
RTR1P40084 YML082WYML082W 1950 nt7.33□□□□□ -1.24
RTR1P40084 ERC1YHR032W 1746 nt7.33□□□□□ -1.24
RTR1P40084 RPS2YGL123W 765 nt7.33□□□□□ -1.24
RTR1P40084 SYF2YGR129W 648 nt7.33□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms