Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YGP1YNL160W 1065 nt6.55□□□□□ -1.36 RIP-Chip
PUB1P32588 YOR012WYOR012W 414 nt6.55□□□□□ -1.36
PUB1P32588 MEK1YOR351C 1494 nt6.54□□□□□ -1.36
PUB1P32588 YGL101WYGL101W 648 nt6.54□□□□□ -1.36 RIP-Chip
PUB1P32588 RRF1YHR038W 693 nt6.54□□□□□ -1.36
PUB1P32588 YLR112WYLR112W 420 nt6.54□□□□□ -1.36 RIP-Chip
PUB1P32588 CPT1YNL130C 1182 nt6.54□□□□□ -1.36 RIP-Chip
PUB1P32588 YCR100CYCR100C 951 nt6.53□□□□□ -1.36
PUB1P32588 HTB1YDR224C 396 nt6.53□□□□□ -1.36 RIP-Chip
PUB1P32588 YGL214WYGL214W 486 nt6.53□□□□□ -1.36
PUB1P32588 PEF1YGR058W 1008 nt6.53□□□□□ -1.36
PUB1P32588 SAY1YGR263C 1275 nt6.53□□□□□ -1.36 RIP-Chip
PUB1P32588 YHR175W-AYHR175W-A 150 nt6.53□□□□□ -1.36 RIP-Chip
PUB1P32588 FUS3YBL016W 1062 nt6.53□□□□□ -1.36
PUB1P32588 IES2YNL215W 963 nt6.53□□□□□ -1.36
PUB1P32588 YNR025CYNR025C 360 nt6.53□□□□□ -1.36
PUB1P32588 YPL136WYPL136W 369 nt6.53□□□□□ -1.36
PUB1P32588 ERV2YPR037C 591 nt6.53□□□□□ -1.36
PUB1P32588 HAC1YFL031W 717 nt6.52□□□□□ -1.37
PUB1P32588 ERG25YGR060W 930 nt6.52□□□□□ -1.37 RIP-Chip
PUB1P32588 MRPL6YHR147C 645 nt6.52□□□□□ -1.37 RIP-Chip
PUB1P32588 STS1YIR011C 960 nt6.52□□□□□ -1.37
PUB1P32588 URA4YLR420W 1095 nt6.52□□□□□ -1.37
PUB1P32588 FYV6YNL133C 522 nt6.52□□□□□ -1.37
PUB1P32588 HFI1YPL254W 1467 nt6.52□□□□□ -1.37
PUB1P32588 HOG1YLR113W 1308 nt6.51□□□□□ -1.37
PUB1P32588 NUP53YMR153W 1428 nt6.51□□□□□ -1.37
PUB1P32588 RDR1YOR380W 1641 nt6.51□□□□□ -1.37
PUB1P32588 YDR034W-BYDR034W-B 156 nt6.51□□□□□ -1.37
PUB1P32588 POP6YGR030C 477 nt6.51□□□□□ -1.37
PUB1P32588 PAC10YGR078C 600 nt6.51□□□□□ -1.37
PUB1P32588 ERP2YAL007C 648 nt6.51□□□□□ -1.37
PUB1P32588 PSY3YLR376C 729 nt6.51□□□□□ -1.37
PUB1P32588 YNL174WYNL174W 573 nt6.51□□□□□ -1.37
PUB1P32588 MSO1YNR049C 633 nt6.51□□□□□ -1.37
PUB1P32588 PET494YNR045W 1470 nt6.51□□□□□ -1.37
PUB1P32588 YIL108WYIL108W 2091 nt6.51□□□□□ -1.37 RIP-Chip
PUB1P32588 CBK1YNL161W 2271 nt6.51□□□□□ -1.37
PUB1P32588 CDC7YDL017W 1524 nt6.5□□□□□ -1.37
PUB1P32588 OSM1YJR051W 1506 nt6.5□□□□□ -1.37
PUB1P32588 YLR173WYLR173W 1827 nt6.5□□□□□ -1.37
PUB1P32588 HDA1YNL021W 2121 nt6.5□□□□□ -1.37
PUB1P32588 SAL1YNL083W 1485 nt6.5□□□□□ -1.37
PUB1P32588 PRP46YPL151C 1356 nt6.5□□□□□ -1.37
PUB1P32588 SKP1YDR328C 585 nt6.5□□□□□ -1.37
PUB1P32588 PHM8YER037W 966 nt6.5□□□□□ -1.37
PUB1P32588 KXD1YGL079W 657 nt6.5□□□□□ -1.37 RIP-Chip
PUB1P32588 YUR1YJL139C 1287 nt6.5□□□□□ -1.37 RIP-Chip
PUB1P32588 YKL202WYKL202W 582 nt6.5□□□□□ -1.37
PUB1P32588 YAL066WYAL066W 309 nt6.5□□□□□ -1.37
PUB1P32588 YLR379WYLR379W 375 nt6.5□□□□□ -1.37
PUB1P32588 RRT1YBL048W 312 nt6.5□□□□□ -1.37
PUB1P32588 RFM1YOR279C 933 nt6.5□□□□□ -1.37
PUB1P32588 YSA1YBR111C 696 nt6.5□□□□□ -1.37
PUB1P32588 RPN5YDL147W 1338 nt6.5□□□□□ -1.37
PUB1P32588 RRP14YKL082C 1305 nt6.5□□□□□ -1.37
PUB1P32588 APM4YOL062C 1476 nt6.49□□□□□ -1.37
PUB1P32588 GRX6YDL010W 696 nt6.49□□□□□ -1.37
PUB1P32588 RPI1YIL119C 1224 nt6.49□□□□□ -1.37 RIP-Chip
PUB1P32588 YJL032WYJL032W 315 nt6.49□□□□□ -1.37
PUB1P32588 DRE2YKR071C 1047 nt6.49□□□□□ -1.37 RIP-Chip
PUB1P32588 MMM1YLL006W 1281 nt6.49□□□□□ -1.37
PUB1P32588 PRE5YMR314W 705 nt6.49□□□□□ -1.37
PUB1P32588 MDM12YOL009C 816 nt6.49□□□□□ -1.37
PUB1P32588 YBR013CYBR013C 390 nt6.49□□□□□ -1.37 RIP-Chip
PUB1P32588 PRP40YKL012W 1752 nt6.49□□□□□ -1.37
PUB1P32588 SRF1YDL133W 1314 nt6.49□□□□□ -1.37 RIP-Chip
PUB1P32588 TFC7YOR110W 1308 nt6.49□□□□□ -1.37
PUB1P32588 YBL111CYBL111C 2004 nt6.49□□□□□ -1.37
PUB1P32588 APM3YBR288C 1452 nt6.48□□□□□ -1.37
PUB1P32588 CLB4YLR210W 1383 nt6.48□□□□□ -1.37
PUB1P32588 SUF3tG(CCC)D 72 nt6.48□□□□□ -1.37
PUB1P32588 EAF5YEL018W 840 nt6.48□□□□□ -1.37
PUB1P32588 NMA2YGR010W 1188 nt6.48□□□□□ -1.37
PUB1P32588 ARO10YDR380W 1908 nt6.48□□□□□ -1.37
PUB1P32588 MHP1YJL042W 4197 nt6.47□□□□□ -1.37 RIP-Chip
PUB1P32588 PPS1YBR276C 2424 nt6.47□□□□□ -1.37
PUB1P32588 AFG2YLR397C 2343 nt6.47□□□□□ -1.37
PUB1P32588 HIM1YDR317W 1245 nt6.47□□□□□ -1.37
PUB1P32588 YLF2YHL014C 1218 nt6.47□□□□□ -1.37
PUB1P32588 SUN4YNL066W 1263 nt6.47□□□□□ -1.37 RIP-Chip
PUB1P32588 YNL194CYNL194C 906 nt6.47□□□□□ -1.37
PUB1P32588 JID1YPR061C 906 nt6.47□□□□□ -1.37
PUB1P32588 YPL247CYPL247C 1572 nt6.47□□□□□ -1.37 RIP-Chip
PUB1P32588 GCN5YGR252W 1320 nt6.47□□□□□ -1.37
PUB1P32588 YLR108CYLR108C 1458 nt6.47□□□□□ -1.37
PUB1P32588 PPE1YHR075C 1203 nt6.46□□□□□ -1.38
PUB1P32588 YIL086CYIL086C 309 nt6.46□□□□□ -1.38
PUB1P32588 PTM1YKL039W 1572 nt6.46□□□□□ -1.38
PUB1P32588 SEC65YML105C 822 nt6.46□□□□□ -1.38
PUB1P32588 URA5YML106W 681 nt6.46□□□□□ -1.38 RIP-Chip
PUB1P32588 MFA2YNL145W 117 nt6.46□□□□□ -1.38 RIP-Chip
PUB1P32588 YPL162CYPL162C 822 nt6.46□□□□□ -1.38
PUB1P32588 ECM8YBR076W 1065 nt6.46□□□□□ -1.38
PUB1P32588 ARA1YBR149W 1035 nt6.46□□□□□ -1.38
PUB1P32588 SDH8YBR269C 417 nt6.46□□□□□ -1.38
PUB1P32588 GLE1YDL207W 1617 nt6.46□□□□□ -1.38
PUB1P32588 NDE1YMR145C 1683 nt6.45□□□□□ -1.38 RIP-Chip
PUB1P32588 PGI1YBR196C 1665 nt6.45□□□□□ -1.38
PUB1P32588 RTG2YGL252C 1767 nt6.45□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms