Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
THBS1P07996 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
THBS1P07996 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.14■■□□□ 1.14
THBS1P07996 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
THBS1P07996 ECEL1P2-201ENST00000461596 1295 ntBASIC22.14■■□□□ 1.13
THBS1P07996 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.14■■□□□ 1.13
THBS1P07996 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
THBS1P07996 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.14■■□□□ 1.13
THBS1P07996 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
THBS1P07996 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.13■■□□□ 1.13
THBS1P07996 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
THBS1P07996 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
THBS1P07996 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
THBS1P07996 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
THBS1P07996 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
THBS1P07996 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
THBS1P07996 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.12■■□□□ 1.13
THBS1P07996 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
THBS1P07996 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.12■■□□□ 1.13
THBS1P07996 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.12■■□□□ 1.13
THBS1P07996 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.12■■□□□ 1.13
THBS1P07996 AC022413.1-201ENST00000624602 984 ntBASIC22.12■■□□□ 1.13
THBS1P07996 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
THBS1P07996 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
THBS1P07996 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.11■■□□□ 1.13
THBS1P07996 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
THBS1P07996 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
THBS1P07996 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
THBS1P07996 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
THBS1P07996 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
THBS1P07996 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
THBS1P07996 AC142381.3-201ENST00000568208 1670 ntBASIC22.11■■□□□ 1.13
THBS1P07996 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
THBS1P07996 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.1■■□□□ 1.13
THBS1P07996 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
THBS1P07996 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.1■■□□□ 1.13
THBS1P07996 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
THBS1P07996 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.09■■□□□ 1.13
THBS1P07996 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
THBS1P07996 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
THBS1P07996 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
THBS1P07996 AC097639.1-201ENST00000565519 1891 ntBASIC22.09■■□□□ 1.13
THBS1P07996 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
THBS1P07996 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
THBS1P07996 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
THBS1P07996 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
THBS1P07996 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
THBS1P07996 AC135731.1-201ENST00000569415 2548 ntBASIC22.08■■□□□ 1.12
THBS1P07996 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.08■■□□□ 1.12
THBS1P07996 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
THBS1P07996 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
THBS1P07996 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.07■■□□□ 1.12
THBS1P07996 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
THBS1P07996 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.07■■□□□ 1.12
THBS1P07996 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.07■■□□□ 1.12
THBS1P07996 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.07■■□□□ 1.12
THBS1P07996 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.06■■□□□ 1.12
THBS1P07996 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
THBS1P07996 AC022211.4-201ENST00000625094 2161 ntBASIC22.05■■□□□ 1.12
THBS1P07996 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
THBS1P07996 RP9P-202ENST00000450133 1212 ntBASIC22.05■■□□□ 1.12
THBS1P07996 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
THBS1P07996 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.05■■□□□ 1.12
THBS1P07996 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
THBS1P07996 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
THBS1P07996 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.04■■□□□ 1.12
THBS1P07996 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
THBS1P07996 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
THBS1P07996 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
THBS1P07996 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
THBS1P07996 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
THBS1P07996 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
THBS1P07996 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.02■■□□□ 1.12
THBS1P07996 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
THBS1P07996 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
THBS1P07996 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
THBS1P07996 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
THBS1P07996 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.02■■□□□ 1.12
THBS1P07996 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
THBS1P07996 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
THBS1P07996 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.01■■□□□ 1.11
THBS1P07996 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
THBS1P07996 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
THBS1P07996 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.01■■□□□ 1.11
THBS1P07996 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
THBS1P07996 AC007029.1-201ENST00000604183 313 ntBASIC22.01■■□□□ 1.11
THBS1P07996 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
THBS1P07996 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
THBS1P07996 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
THBS1P07996 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
THBS1P07996 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
THBS1P07996 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms