Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LCATP04180 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCATP04180 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.94■□□□□ 0.94
LCATP04180 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.94■□□□□ 0.94
LCATP04180 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCATP04180 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.94■□□□□ 0.94
LCATP04180 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LCATP04180 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCATP04180 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LCATP04180 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCATP04180 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.92■□□□□ 0.94
LCATP04180 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.92■□□□□ 0.94
LCATP04180 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.92■□□□□ 0.94
LCATP04180 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.92■□□□□ 0.94
LCATP04180 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.92■□□□□ 0.94
LCATP04180 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCATP04180 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LCATP04180 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.92■□□□□ 0.94
LCATP04180 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LCATP04180 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.91■□□□□ 0.94
LCATP04180 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCATP04180 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCATP04180 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LCATP04180 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCATP04180 AC020928.2-201ENST00000588717 2197 ntBASIC20.9■□□□□ 0.94
LCATP04180 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCATP04180 AC096887.2-201ENST00000623443 1957 ntBASIC20.9■□□□□ 0.94
LCATP04180 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
LCATP04180 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LCATP04180 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
LCATP04180 RP9P-202ENST00000450133 1212 ntBASIC20.9■□□□□ 0.94
LCATP04180 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.9■□□□□ 0.94
LCATP04180 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.89■□□□□ 0.94
LCATP04180 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LCATP04180 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCATP04180 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LCATP04180 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LCATP04180 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
LCATP04180 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.89■□□□□ 0.93
LCATP04180 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.89■□□□□ 0.93
LCATP04180 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCATP04180 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCATP04180 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCATP04180 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCATP04180 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.88■□□□□ 0.93
LCATP04180 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LCATP04180 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCATP04180 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCATP04180 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCATP04180 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCATP04180 AC093536.1-201ENST00000569153 554 ntBASIC20.87■□□□□ 0.93
LCATP04180 AC007029.1-201ENST00000604183 313 ntBASIC20.87■□□□□ 0.93
LCATP04180 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
LCATP04180 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LCATP04180 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCATP04180 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.86■□□□□ 0.93
LCATP04180 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCATP04180 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LCATP04180 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.86■□□□□ 0.93
LCATP04180 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.86■□□□□ 0.93
LCATP04180 AC135731.1-201ENST00000569415 2548 ntBASIC20.86■□□□□ 0.93
LCATP04180 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCATP04180 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LCATP04180 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LCATP04180 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCATP04180 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
LCATP04180 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.85■□□□□ 0.93
LCATP04180 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.85■□□□□ 0.93
LCATP04180 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.85■□□□□ 0.93
LCATP04180 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LCATP04180 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCATP04180 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LCATP04180 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.84■□□□□ 0.93
LCATP04180 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
LCATP04180 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LCATP04180 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCATP04180 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCATP04180 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
LCATP04180 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCATP04180 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCATP04180 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCATP04180 RNF126P1-201ENST00000567452 1320 ntBASIC20.82■□□□□ 0.92
LCATP04180 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LCATP04180 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LCATP04180 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.82■□□□□ 0.92
LCATP04180 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCATP04180 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCATP04180 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCATP04180 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCATP04180 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
LCATP04180 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
LCATP04180 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LCATP04180 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms