Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1P01909 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQA1P01909 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1P01909 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1P01909 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HLA-DQA1P01909 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1P01909 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1P01909 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1P01909 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1P01909 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1P01909 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1P01909 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1P01909 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 AC096887.2-201ENST00000623443 1957 ntBASIC17.93■□□□□ 0.46
HLA-DQA1P01909 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1P01909 AP003733.4-201ENST00000623785 1697 ntBASIC17.93■□□□□ 0.46
HLA-DQA1P01909 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 AC136428.2-201ENST00000563187 214 ntBASIC17.92■□□□□ 0.46
HLA-DQA1P01909 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DQA1P01909 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 PKD1P6-201ENST00000343738 4769 ntBASIC17.91■□□□□ 0.46
HLA-DQA1P01909 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DQA1P01909 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQA1P01909 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DQA1P01909 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQA1P01909 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQA1P01909 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQA1P01909 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DQA1P01909 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQA1P01909 AC135983.2-203ENST00000454486 1613 ntBASIC17.87■□□□□ 0.45
HLA-DQA1P01909 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQA1P01909 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQA1P01909 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DQA1P01909 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.87■□□□□ 0.45
HLA-DQA1P01909 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQA1P01909 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DQA1P01909 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms