Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DQA2P01906 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DQA2P01906 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DQA2P01906 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
HLA-DQA2P01906 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DQA2P01906 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DQA2P01906 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DQA2P01906 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HLA-DQA2P01906 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DQA2P01906 AC096887.2-201ENST00000623443 1957 ntBASIC21.39■■□□□ 1.01
HLA-DQA2P01906 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.39■■□□□ 1.01
HLA-DQA2P01906 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HLA-DQA2P01906 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQA2P01906 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DQA2P01906 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQA2P01906 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA2P01906 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.35■■□□□ 1.01
HLA-DQA2P01906 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA2P01906 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HLA-DQA2P01906 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.33■■□□□ 1.01
HLA-DQA2P01906 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DQA2P01906 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HLA-DQA2P01906 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HLA-DQA2P01906 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HLA-DQA2P01906 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.32■■□□□ 1
HLA-DQA2P01906 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.32■■□□□ 1
HLA-DQA2P01906 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA2P01906 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA2P01906 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
HLA-DQA2P01906 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA2P01906 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms