Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CILPO75339 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CILPO75339 AC096887.2-201ENST00000623443 1957 ntBASIC25.66■■□□□ 1.7
CILPO75339 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CILPO75339 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CILPO75339 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CILPO75339 DUX4L9-201ENST00000449051 1259 ntBASIC25.66■■□□□ 1.7
CILPO75339 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.66■■□□□ 1.7
CILPO75339 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CILPO75339 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CILPO75339 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
CILPO75339 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CILPO75339 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CILPO75339 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CILPO75339 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CILPO75339 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CILPO75339 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.64■■□□□ 1.7
CILPO75339 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CILPO75339 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CILPO75339 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CILPO75339 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
CILPO75339 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CILPO75339 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CILPO75339 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CILPO75339 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.63■■□□□ 1.69
CILPO75339 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CILPO75339 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
CILPO75339 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CILPO75339 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CILPO75339 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
CILPO75339 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CILPO75339 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CILPO75339 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CILPO75339 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.61■■□□□ 1.69
CILPO75339 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CILPO75339 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CILPO75339 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CILPO75339 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.6■■□□□ 1.69
CILPO75339 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.6■■□□□ 1.69
CILPO75339 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CILPO75339 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CILPO75339 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.59■■□□□ 1.69
CILPO75339 AC004987.1-201ENST00000428627 508 ntBASIC25.59■■□□□ 1.69
CILPO75339 AC018755.3-202ENST00000596210 929 ntBASIC25.59■■□□□ 1.69
CILPO75339 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CILPO75339 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CILPO75339 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CILPO75339 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.58■■□□□ 1.69
CILPO75339 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.58■■□□□ 1.69
CILPO75339 MIR6765-201ENST00000614092 87 ntBASIC25.58■■□□□ 1.69
CILPO75339 AC012354.3-201ENST00000623734 483 ntBASIC25.58■■□□□ 1.69
CILPO75339 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CILPO75339 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CILPO75339 ATP5G2P3-201ENST00000429083 425 ntBASIC25.57■■□□□ 1.68
CILPO75339 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
CILPO75339 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CILPO75339 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.55■■□□□ 1.68
CILPO75339 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.55■■□□□ 1.68
CILPO75339 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CILPO75339 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CILPO75339 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
CILPO75339 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CILPO75339 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CILPO75339 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CILPO75339 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.54■■□□□ 1.68
CILPO75339 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.54■■□□□ 1.68
CILPO75339 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.54■■□□□ 1.68
CILPO75339 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CILPO75339 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CILPO75339 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CILPO75339 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CILPO75339 DUX4L18-201ENST00000553347 1267 ntBASIC25.53■■□□□ 1.68
CILPO75339 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.53■■□□□ 1.68
CILPO75339 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CILPO75339 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CILPO75339 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CILPO75339 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CILPO75339 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CILPO75339 TSPY13P-201ENST00000338964 914 ntBASIC25.52■■□□□ 1.68
CILPO75339 KRT18P10-201ENST00000388836 1287 ntBASIC25.52■■□□□ 1.68
CILPO75339 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CILPO75339 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.52■■□□□ 1.68
CILPO75339 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.68
CILPO75339 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CILPO75339 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CILPO75339 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CILPO75339 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CILPO75339 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.51■■□□□ 1.67
CILPO75339 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
CILPO75339 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CILPO75339 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.51■■□□□ 1.67
CILPO75339 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CILPO75339 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CILPO75339 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CILPO75339 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CILPO75339 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.49■■□□□ 1.67
CILPO75339 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CILPO75339 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
CILPO75339 RPS2P7-201ENST00000447334 885 ntBASIC25.49■■□□□ 1.67
CILPO75339 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms