Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
GDF9O60383 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.81■■□□□ 1.4
GDF9O60383 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GDF9O60383 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.8■■□□□ 1.4
GDF9O60383 WHAMMP3-201ENST00000611636 1609 ntBASIC23.8■■□□□ 1.4
GDF9O60383 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.8■■□□□ 1.4
GDF9O60383 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.79■■□□□ 1.4
GDF9O60383 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.79■■□□□ 1.4
GDF9O60383 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.79■■□□□ 1.4
GDF9O60383 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GDF9O60383 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GDF9O60383 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GDF9O60383 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GDF9O60383 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
GDF9O60383 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.78■■□□□ 1.4
GDF9O60383 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.78■■□□□ 1.4
GDF9O60383 MIR3621-201ENST00000580529 85 ntBASIC23.78■■□□□ 1.4
GDF9O60383 MIR4466-201ENST00000606121 54 ntBASIC23.78■■□□□ 1.4
GDF9O60383 AP002414.2-202ENST00000590929 1450 ntBASIC23.78■■□□□ 1.4
GDF9O60383 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GDF9O60383 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GDF9O60383 AC120024.1-201ENST00000562672 995 ntBASIC23.77■■□□□ 1.4
GDF9O60383 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.77■■□□□ 1.4
GDF9O60383 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GDF9O60383 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GDF9O60383 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
GDF9O60383 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.76■■□□□ 1.39
GDF9O60383 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GDF9O60383 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
GDF9O60383 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GDF9O60383 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.76■■□□□ 1.39
GDF9O60383 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.76■■□□□ 1.39
GDF9O60383 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GDF9O60383 AC133561.4-201ENST00000566112 224 ntBASIC23.76■■□□□ 1.39
GDF9O60383 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GDF9O60383 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GDF9O60383 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.75■■□□□ 1.39
GDF9O60383 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GDF9O60383 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.75■■□□□ 1.39
GDF9O60383 AC026271.2-201ENST00000428091 497 ntBASIC23.75■■□□□ 1.39
GDF9O60383 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GDF9O60383 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
GDF9O60383 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GDF9O60383 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GDF9O60383 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.74■■□□□ 1.39
GDF9O60383 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GDF9O60383 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GDF9O60383 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GDF9O60383 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GDF9O60383 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GDF9O60383 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GDF9O60383 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GDF9O60383 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
GDF9O60383 AC010997.5-201ENST00000609182 354 ntBASIC23.73■■□□□ 1.39
GDF9O60383 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.73■■□□□ 1.39
GDF9O60383 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
GDF9O60383 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GDF9O60383 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.72■■□□□ 1.39
GDF9O60383 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.72■■□□□ 1.39
GDF9O60383 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
GDF9O60383 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.72■■□□□ 1.39
GDF9O60383 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
GDF9O60383 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.71■■□□□ 1.39
GDF9O60383 AC104564.3-201ENST00000582367 638 ntBASIC23.71■■□□□ 1.39
GDF9O60383 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.71■■□□□ 1.39
GDF9O60383 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GDF9O60383 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
GDF9O60383 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GDF9O60383 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.7■■□□□ 1.38
GDF9O60383 MIR6724-1-201ENST00000616420 92 ntBASIC23.7■■□□□ 1.38
GDF9O60383 MIR6724-2-201ENST00000616483 92 ntBASIC23.7■■□□□ 1.38
GDF9O60383 MIR6724-4-201ENST00000617390 92 ntBASIC23.7■■□□□ 1.38
GDF9O60383 MIR6724-3-201ENST00000622482 92 ntBASIC23.7■■□□□ 1.38
GDF9O60383 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GDF9O60383 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GDF9O60383 AL356740.2-201ENST00000601559 647 ntBASIC23.69■■□□□ 1.38
GDF9O60383 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
GDF9O60383 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.69■■□□□ 1.38
GDF9O60383 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.68■■□□□ 1.38
GDF9O60383 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GDF9O60383 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.68■■□□□ 1.38
GDF9O60383 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.68■■□□□ 1.38
GDF9O60383 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.67■■□□□ 1.38
GDF9O60383 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
GDF9O60383 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GDF9O60383 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.67■■□□□ 1.38
GDF9O60383 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
GDF9O60383 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.67■■□□□ 1.38
GDF9O60383 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.67■■□□□ 1.38
GDF9O60383 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GDF9O60383 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
GDF9O60383 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.67■■□□□ 1.38
GDF9O60383 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
GDF9O60383 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms