Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TNFSF12O43508 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF12O43508 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF12O43508 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF12O43508 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFSF12O43508 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TNFSF12O43508 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF12O43508 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.83■□□□□ 0.77
TNFSF12O43508 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF12O43508 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF12O43508 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TNFSF12O43508 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF12O43508 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF12O43508 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.83■□□□□ 0.76
TNFSF12O43508 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF12O43508 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TNFSF12O43508 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 AC148477.6-201ENST00000623746 465 ntBASIC19.82■□□□□ 0.76
TNFSF12O43508 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 AL359504.2-201ENST00000605506 1601 ntBASIC19.82■□□□□ 0.76
TNFSF12O43508 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF12O43508 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TNFSF12O43508 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF12O43508 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFSF12O43508 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFSF12O43508 HLA-V-202ENST00000446817 847 ntBASIC19.81■□□□□ 0.76
TNFSF12O43508 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.81■□□□□ 0.76
TNFSF12O43508 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFSF12O43508 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF12O43508 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF12O43508 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TNFSF12O43508 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF12O43508 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF12O43508 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFSF12O43508 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12O43508 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12O43508 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12O43508 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12O43508 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFSF12O43508 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF12O43508 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12O43508 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12O43508 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF12O43508 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF12O43508 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12O43508 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12O43508 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TNFSF12O43508 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12O43508 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12O43508 AL139125.2-201ENST00000623134 1869 ntBASIC19.77■□□□□ 0.76
TNFSF12O43508 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF12O43508 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF12O43508 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12O43508 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12O43508 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.77■□□□□ 0.76
TNFSF12O43508 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12O43508 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12O43508 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12O43508 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF12O43508 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFSF12O43508 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12O43508 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFSF12O43508 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12O43508 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12O43508 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12O43508 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.74■□□□□ 0.75
TNFSF12O43508 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF12O43508 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TNFSF12O43508 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12O43508 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12O43508 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms