Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP9YO00507 PBX2P1-201ENST00000493219 1291 ntBASIC21.29■■□□□ 1
USP9YO00507 MIR4281-201ENST00000580852 62 ntBASIC21.29■■□□□ 1
USP9YO00507 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.28■■□□□ 1
USP9YO00507 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP9YO00507 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.28■■□□□ 1
USP9YO00507 AP004833.2-201ENST00000532228 1454 ntBASIC21.28■■□□□ 1
USP9YO00507 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
USP9YO00507 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.28■■□□□ 1
USP9YO00507 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP9YO00507 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP9YO00507 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
USP9YO00507 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
USP9YO00507 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.27■■□□□ 1
USP9YO00507 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.27■□□□□ 0.99
USP9YO00507 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.27■□□□□ 0.99
USP9YO00507 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP9YO00507 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP9YO00507 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.26■□□□□ 0.99
USP9YO00507 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.26■□□□□ 0.99
USP9YO00507 AC120024.1-201ENST00000562672 995 ntBASIC21.26■□□□□ 0.99
USP9YO00507 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
USP9YO00507 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
USP9YO00507 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP9YO00507 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.26■□□□□ 0.99
USP9YO00507 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.25■□□□□ 0.99
USP9YO00507 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.25■□□□□ 0.99
USP9YO00507 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.25■□□□□ 0.99
USP9YO00507 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.24■□□□□ 0.99
USP9YO00507 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP9YO00507 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.24■□□□□ 0.99
USP9YO00507 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.24■□□□□ 0.99
USP9YO00507 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.24■□□□□ 0.99
USP9YO00507 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
USP9YO00507 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.24■□□□□ 0.99
USP9YO00507 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.24■□□□□ 0.99
USP9YO00507 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP9YO00507 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP9YO00507 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.22■□□□□ 0.99
USP9YO00507 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.22■□□□□ 0.99
USP9YO00507 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.22■□□□□ 0.99
USP9YO00507 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP9YO00507 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP9YO00507 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.21■□□□□ 0.99
USP9YO00507 EDA-201ENST00000338901 1233 ntBASIC21.21■□□□□ 0.99
USP9YO00507 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP9YO00507 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.21■□□□□ 0.99
USP9YO00507 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.2■□□□□ 0.99
USP9YO00507 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP9YO00507 AC105265.2-201ENST00000467189 838 ntBASIC21.2■□□□□ 0.98
USP9YO00507 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP9YO00507 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP9YO00507 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
USP9YO00507 WHAMMP3-201ENST00000611636 1609 ntBASIC21.19■□□□□ 0.98
USP9YO00507 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.19■□□□□ 0.98
USP9YO00507 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.19■□□□□ 0.98
USP9YO00507 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP9YO00507 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP9YO00507 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.19■□□□□ 0.98
USP9YO00507 MTDHP2-201ENST00000601468 714 ntBASIC21.19■□□□□ 0.98
USP9YO00507 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.19■□□□□ 0.98
USP9YO00507 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP9YO00507 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP9YO00507 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP9YO00507 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP9YO00507 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP9YO00507 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
USP9YO00507 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP9YO00507 AL355001.2-201ENST00000620617 1191 ntBASIC21.18■□□□□ 0.98
USP9YO00507 RARRES2P11-201ENST00000635158 484 ntBASIC21.18■□□□□ 0.98
USP9YO00507 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.18■□□□□ 0.98
USP9YO00507 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.17■□□□□ 0.98
USP9YO00507 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.17■□□□□ 0.98
USP9YO00507 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.17■□□□□ 0.98
USP9YO00507 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP9YO00507 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP9YO00507 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP9YO00507 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.17■□□□□ 0.98
USP9YO00507 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.16■□□□□ 0.98
USP9YO00507 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.16■□□□□ 0.98
USP9YO00507 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
USP9YO00507 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP9YO00507 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.16■□□□□ 0.98
USP9YO00507 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
USP9YO00507 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP9YO00507 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP9YO00507 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USP9YO00507 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP9YO00507 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
USP9YO00507 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP9YO00507 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP9YO00507 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.14■□□□□ 0.98
USP9YO00507 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP9YO00507 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP9YO00507 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.14■□□□□ 0.97
USP9YO00507 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP9YO00507 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP9YO00507 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP9YO00507 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.14■□□□□ 0.97
USP9YO00507 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms