Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TRIM49BA6NDI0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM49BA6NDI0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM49BA6NDI0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 AC092296.2-201ENST00000589470 999 ntBASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM49BA6NDI0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM49BA6NDI0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
TRIM49BA6NDI0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
TRIM49BA6NDI0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 AC022211.4-201ENST00000625094 2161 ntBASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM49BA6NDI0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM49BA6NDI0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM49BA6NDI0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
TRIM49BA6NDI0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.5■■□□□ 1.83
TRIM49BA6NDI0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM49BA6NDI0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM49BA6NDI0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM49BA6NDI0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.49■■□□□ 1.83
TRIM49BA6NDI0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM49BA6NDI0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.48■■□□□ 1.83
TRIM49BA6NDI0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.48■■□□□ 1.83
TRIM49BA6NDI0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.48■■□□□ 1.83
TRIM49BA6NDI0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TRIM49BA6NDI0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 AC022413.1-201ENST00000624602 984 ntBASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 SMPD5-203ENST00000639008 1464 ntBASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 AC138932.3-201ENST00000567634 1902 ntBASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM49BA6NDI0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM49BA6NDI0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM49BA6NDI0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.46■■□□□ 1.83
TRIM49BA6NDI0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM49BA6NDI0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.46■■□□□ 1.83
TRIM49BA6NDI0 AC142381.3-201ENST00000568208 1670 ntBASIC26.45■■□□□ 1.82
TRIM49BA6NDI0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM49BA6NDI0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM49BA6NDI0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM49BA6NDI0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM49BA6NDI0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49BA6NDI0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49BA6NDI0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.44■■□□□ 1.82
TRIM49BA6NDI0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM49BA6NDI0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.43■■□□□ 1.82
TRIM49BA6NDI0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM49BA6NDI0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM49BA6NDI0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 MIR3960-201ENST00000583311 91 ntBASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM49BA6NDI0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM49BA6NDI0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM49BA6NDI0 MIR4449-201ENST00000578365 66 ntBASIC26.41■■□□□ 1.82
TRIM49BA6NDI0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM49BA6NDI0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
TRIM49BA6NDI0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM49BA6NDI0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
TRIM49BA6NDI0 AC093323.1-202ENST00000635031 2045 ntBASIC26.39■■□□□ 1.82
TRIM49BA6NDI0 AC097639.1-201ENST00000565519 1891 ntBASIC26.39■■□□□ 1.82
TRIM49BA6NDI0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM49BA6NDI0 ECEL1P2-201ENST00000461596 1295 ntBASIC26.39■■□□□ 1.82
TRIM49BA6NDI0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
TRIM49BA6NDI0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM49BA6NDI0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
TRIM49BA6NDI0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM49BA6NDI0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM49BA6NDI0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms