Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SH3D21A4FU49 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3D21A4FU49 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3D21A4FU49 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH3D21A4FU49 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3D21A4FU49 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
SH3D21A4FU49 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH3D21A4FU49 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3D21A4FU49 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3D21A4FU49 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SH3D21A4FU49 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3D21A4FU49 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.15■■□□□ 1.14
SH3D21A4FU49 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SH3D21A4FU49 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3D21A4FU49 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH3D21A4FU49 WHAMMP3-201ENST00000611636 1609 ntBASIC22.14■■□□□ 1.14
SH3D21A4FU49 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH3D21A4FU49 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SH3D21A4FU49 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SH3D21A4FU49 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SH3D21A4FU49 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3D21A4FU49 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH3D21A4FU49 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.13■■□□□ 1.13
SH3D21A4FU49 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH3D21A4FU49 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH3D21A4FU49 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH3D21A4FU49 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SH3D21A4FU49 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH3D21A4FU49 AC012354.3-201ENST00000623734 483 ntBASIC22.12■■□□□ 1.13
SH3D21A4FU49 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SH3D21A4FU49 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH3D21A4FU49 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.11■■□□□ 1.13
SH3D21A4FU49 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.1■■□□□ 1.13
SH3D21A4FU49 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.1■■□□□ 1.13
SH3D21A4FU49 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3D21A4FU49 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SH3D21A4FU49 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SH3D21A4FU49 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3D21A4FU49 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3D21A4FU49 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.08■■□□□ 1.13
SH3D21A4FU49 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3D21A4FU49 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SH3D21A4FU49 AC126177.7-201ENST00000547904 679 ntBASIC22.08■■□□□ 1.13
SH3D21A4FU49 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
SH3D21A4FU49 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SH3D21A4FU49 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3D21A4FU49 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.07■■□□□ 1.12
SH3D21A4FU49 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.07■■□□□ 1.12
SH3D21A4FU49 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SH3D21A4FU49 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SH3D21A4FU49 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.07■■□□□ 1.12
SH3D21A4FU49 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3D21A4FU49 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SH3D21A4FU49 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3D21A4FU49 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SH3D21A4FU49 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SH3D21A4FU49 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.06■■□□□ 1.12
SH3D21A4FU49 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3D21A4FU49 AL139125.2-201ENST00000623134 1869 ntBASIC22.05■■□□□ 1.12
SH3D21A4FU49 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3D21A4FU49 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3D21A4FU49 AC092296.2-201ENST00000589470 999 ntBASIC22.05■■□□□ 1.12
SH3D21A4FU49 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.05■■□□□ 1.12
SH3D21A4FU49 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3D21A4FU49 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3D21A4FU49 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH3D21A4FU49 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.05■■□□□ 1.12
SH3D21A4FU49 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH3D21A4FU49 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3D21A4FU49 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.04■■□□□ 1.12
SH3D21A4FU49 AC022211.4-201ENST00000625094 2161 ntBASIC22.04■■□□□ 1.12
SH3D21A4FU49 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3D21A4FU49 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.04■■□□□ 1.12
SH3D21A4FU49 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.04■■□□□ 1.12
SH3D21A4FU49 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3D21A4FU49 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3D21A4FU49 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH3D21A4FU49 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
SH3D21A4FU49 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms