Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DUXBA0A1W2PPF3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.55■□□□□ 0.72
DUXBA0A1W2PPF3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.55■□□□□ 0.72
DUXBA0A1W2PPF3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DUXBA0A1W2PPF3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DUXBA0A1W2PPF3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DUXBA0A1W2PPF3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 LINC00543-201ENST00000567234 1845 ntBASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DUXBA0A1W2PPF3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 AC097639.1-201ENST00000565519 1891 ntBASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
DUXBA0A1W2PPF3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DUXBA0A1W2PPF3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DUXBA0A1W2PPF3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DUXBA0A1W2PPF3 AC087741.3-201ENST00000624270 1347 ntBASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 AC044849.2-201ENST00000606596 710 ntBASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUXBA0A1W2PPF3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DUXBA0A1W2PPF3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DUXBA0A1W2PPF3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DUXBA0A1W2PPF3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DUXBA0A1W2PPF3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
DUXBA0A1W2PPF3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DUXBA0A1W2PPF3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.49■□□□□ 0.71
DUXBA0A1W2PPF3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DUXBA0A1W2PPF3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
DUXBA0A1W2PPF3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 AC008813.1-201ENST00000536597 885 ntBASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DUXBA0A1W2PPF3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DUXBA0A1W2PPF3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 SLC6A10P-202ENST00000431994 2058 ntBASIC19.44■□□□□ 0.7
DUXBA0A1W2PPF3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 AC021231.2-201ENST00000594613 730 ntBASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 AC148477.6-201ENST00000623746 465 ntBASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DUXBA0A1W2PPF3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms