Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-1A0A0K0K1D8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-1A0A0K0K1D8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRBV6-1A0A0K0K1D8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRBV6-1A0A0K0K1D8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRBV6-1A0A0K0K1D8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-1A0A0K0K1D8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-1A0A0K0K1D8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-1A0A0K0K1D8 AC087741.3-201ENST00000624270 1347 ntBASIC17.96■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC068473.5-201ENST00000616428 2072 ntBASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 SLC6A10P-202ENST00000431994 2058 ntBASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC133561.1-201ENST00000568600 2415 ntBASIC17.93■□□□□ 0.46
TRBV6-1A0A0K0K1D8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-1A0A0K0K1D8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV6-1A0A0K0K1D8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-1A0A0K0K1D8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC008813.1-201ENST00000536597 885 ntBASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC044849.2-201ENST00000606596 710 ntBASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC148477.6-201ENST00000623746 465 ntBASIC17.91■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AL359504.2-201ENST00000605506 1601 ntBASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC021231.2-201ENST00000594613 730 ntBASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-1A0A0K0K1D8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV6-1A0A0K0K1D8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV6-1A0A0K0K1D8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV6-1A0A0K0K1D8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms