Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 AC141586.4-201ENST00000624558 1573 ntBASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV12-1A0A0B4J245 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-1A0A0B4J245 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-1A0A0B4J245 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-1A0A0B4J245 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-1A0A0B4J245 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-1A0A0B4J245 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-1A0A0B4J245 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV12-1A0A0B4J245 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAV12-1A0A0B4J245 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV12-1A0A0B4J245 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-1A0A0B4J245 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-1A0A0B4J245 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-1A0A0B4J245 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-1A0A0B4J245 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV12-1A0A0B4J245 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 LINC00273-201ENST00000539813 1452 ntBASIC16.8■□□□□ 0.28
TRAV12-1A0A0B4J245 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-1A0A0B4J245 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-1A0A0B4J245 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV12-1A0A0B4J245 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV12-1A0A0B4J245 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV12-1A0A0B4J245 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV12-1A0A0B4J245 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV12-1A0A0B4J245 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAV12-1A0A0B4J245 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-1A0A0B4J245 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-1A0A0B4J245 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV12-1A0A0B4J245 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms