Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 LINC01124-201ENST00000409786 2117 ntBASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV18A0A075B6X5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV18A0A075B6X5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV18A0A075B6X5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV18A0A075B6X5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRAV18A0A075B6X5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAV18A0A075B6X5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV18A0A075B6X5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TRAV18A0A075B6X5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV18A0A075B6X5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV18A0A075B6X5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV18A0A075B6X5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV18A0A075B6X5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 AP003733.4-201ENST00000623785 1697 ntBASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV18A0A075B6X5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV18A0A075B6X5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV18A0A075B6X5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV18A0A075B6X5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV18A0A075B6X5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 AC087741.3-201ENST00000624270 1347 ntBASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV18A0A075B6X5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
TRAV18A0A075B6X5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
TRAV18A0A075B6X5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV18A0A075B6X5 AP006261.1-201ENST00000584783 668 ntBASIC20.45■□□□□ 0.86
TRAV18A0A075B6X5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV18A0A075B6X5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV18A0A075B6X5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV18A0A075B6X5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV18A0A075B6X5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 AC012676.1-201ENST00000574705 1949 ntBASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms