Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AC023157.3-201ENST00000619086 2088 ntBASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AC009065.1-201ENST00000564055 1225 ntBASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH1Q9Y2L9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 CKBP1-201ENST00000565489 1086 ntBASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 AL139327.4-201ENST00000612362 153 ntBASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 AC131212.4-201ENST00000623606 975 ntBASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH1Q9Y2L9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 AC010491.1-201ENST00000563101 2797 ntBASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 UNC93B2-201ENST00000285383 730 ntBASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 AC116562.2-201ENST00000507042 360 ntBASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH1Q9Y2L9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms