Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
LHX6Q9UPM6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 AC148477.5-201ENST00000625164 1645 ntBASIC16.09■□□□□ 0.17
LHX6Q9UPM6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 AL049829.1-201ENST00000465411 156 ntBASIC16.09■□□□□ 0.17
LHX6Q9UPM6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC16.09■□□□□ 0.17
LHX6Q9UPM6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 TMEM261P1-201ENST00000604899 340 ntBASIC16.09■□□□□ 0.17
LHX6Q9UPM6 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LHX6Q9UPM6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LHX6Q9UPM6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 AC098614.1-201ENST00000368528 745 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 BCYRN1-201ENST00000418539 200 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 HCG4-201ENST00000418983 998 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 AL117351.1-201ENST00000438864 766 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 AL031058.1-201ENST00000561592 888 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 TP53TG3HP-202ENST00000569755 579 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 SPTSSB-204ENST00000617024 1292 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 MIR6080-201ENST00000617359 66 ntBASIC16.08■□□□□ 0.16
LHX6Q9UPM6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.08■□□□□ 0.16
LHX6Q9UPM6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LHX6Q9UPM6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms