Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 KRT18P38-201ENST00000449496 1282 ntBASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 AC092647.4-201ENST00000457211 535 ntBASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 AC007326.2-201ENST00000624224 7579 ntBASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.8■□□□□ 0.12
TMCC3Q9ULS5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC008741.2-201ENST00000612792 3115 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 FRMD8P1-201ENST00000440433 1524 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC026691.1-201ENST00000602502 2017 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TUBB8P12-201ENST00000308911 1335 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TUBB7P-202ENST00000428444 1305 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TUBB8P7-204ENST00000567960 1332 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TERF1P1-201ENST00000311003 1181 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC011840.4-201ENST00000578471 627 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC068418.2-201ENST00000577309 3703 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 AC009336.1-201ENST00000608941 1553 ntBASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
TMCC3Q9ULS5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 MIR600HG-201ENST00000449175 5984 ntBASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 AL138831.2-201ENST00000606564 490 ntBASIC15.78■□□□□ 0.12
TMCC3Q9ULS5 AC124864.1-201ENST00000623408 392 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms