Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 RN7SL618P-201ENST00000477850 296 ntBASIC21.33■■□□□ 1.01
CCNL1Q9UK58 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNL1Q9UK58 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.33■■□□□ 1
CCNL1Q9UK58 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.33■■□□□ 1
CCNL1Q9UK58 AC073439.1-201ENST00000624121 1774 ntBASIC21.33■■□□□ 1
CCNL1Q9UK58 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CCNL1Q9UK58 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.32■■□□□ 1
CCNL1Q9UK58 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.32■■□□□ 1
CCNL1Q9UK58 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 AL355312.1-201ENST00000407115 2176 ntBASIC21.32■■□□□ 1
CCNL1Q9UK58 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.32■■□□□ 1
CCNL1Q9UK58 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCNL1Q9UK58 SPDYE18-201ENST00000510091 1050 ntBASIC21.32■■□□□ 1
CCNL1Q9UK58 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.32■■□□□ 1
CCNL1Q9UK58 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CCNL1Q9UK58 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CCNL1Q9UK58 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.32■■□□□ 1
CCNL1Q9UK58 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCNL1Q9UK58 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCNL1Q9UK58 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.32■■□□□ 1
CCNL1Q9UK58 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCNL1Q9UK58 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 AC012317.2-201ENST00000623305 2251 ntBASIC21.31■■□□□ 1
CCNL1Q9UK58 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.31■■□□□ 1
CCNL1Q9UK58 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCNL1Q9UK58 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CCNL1Q9UK58 RN7SL837P-201ENST00000463010 287 ntBASIC21.31■■□□□ 1
CCNL1Q9UK58 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.31■■□□□ 1
CCNL1Q9UK58 RNA5SP410-201ENST00000516285 106 ntBASIC21.31■■□□□ 1
CCNL1Q9UK58 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.31■■□□□ 1
CCNL1Q9UK58 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.31■■□□□ 1
CCNL1Q9UK58 AL512361.1-201ENST00000554200 418 ntBASIC21.31■■□□□ 1
CCNL1Q9UK58 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CCNL1Q9UK58 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.31■■□□□ 1
CCNL1Q9UK58 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNL1Q9UK58 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.31■■□□□ 1
CCNL1Q9UK58 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.3■■□□□ 1
CCNL1Q9UK58 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCNL1Q9UK58 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.3■■□□□ 1
CCNL1Q9UK58 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.3■■□□□ 1
CCNL1Q9UK58 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.3■■□□□ 1
CCNL1Q9UK58 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCNL1Q9UK58 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 TTTY23B-201ENST00000442790 549 ntBASIC21.3■■□□□ 1
CCNL1Q9UK58 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.3■■□□□ 1
CCNL1Q9UK58 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.3■■□□□ 1
CCNL1Q9UK58 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNL1Q9UK58 AC044860.1-202ENST00000559481 777 ntBASIC21.3■■□□□ 1
CCNL1Q9UK58 SLC7A15P-201ENST00000424028 1363 ntBASIC21.3■■□□□ 1
CCNL1Q9UK58 AL021920.2-201ENST00000624828 1351 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms