Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RIMBP3Q9UFD9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 AL627389.1-201ENST00000413508 1182 ntBASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 AC133539.2-201ENST00000604757 467 ntBASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RIMBP3Q9UFD9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 PTK2-225ENST00000520892 571 ntTSL 4 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC26.38■■□□□ 1.81
RIMBP3Q9UFD9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 REXO1L11P-201ENST00000620964 1927 ntBASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 AC005702.4-201ENST00000618393 416 ntBASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 AL158212.4-201ENST00000624062 1286 ntBASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIMBP3Q9UFD9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC016694.1-201ENST00000434179 700 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 RPL13AP19-201ENST00000434320 584 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC104784.1-201ENST00000473096 294 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 IQSEC3P1-201ENST00000538799 536 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC124283.3-201ENST00000570869 594 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC007952.6-201ENST00000573168 2673 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC003957.1-201ENST00000625108 2673 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 BRI3BPP1-201ENST00000594224 787 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 MIR6069-201ENST00000620069 79 ntBASIC26.36■■□□□ 1.81
RIMBP3Q9UFD9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms