Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 AC093512.1-201ENST00000617969 520 ntBASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.35■□□□□ 0.21
LRIT1Q9P2V4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AC092474.2-201ENST00000424288 719 ntBASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AC091167.2-201ENST00000579581 588 ntBASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AC011467.4-201ENST00000594891 528 ntBASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRIT1Q9P2V4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRIT1Q9P2V4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRIT1Q9P2V4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRIT1Q9P2V4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LRIT1Q9P2V4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRIT1Q9P2V4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRIT1Q9P2V4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 FAM86GP-201ENST00000448322 971 ntBASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 AC109635.5-201ENST00000533593 962 ntBASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 AP001350.2-201ENST00000625104 1094 ntBASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 SLC22A20-204ENST00000530038 1673 ntBASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 AC116353.5-201ENST00000638148 1699 ntBASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms