Protein–RNA interactions for Protein: Q9NZC3

GDE1, Glycerophosphodiester phosphodiesterase 1, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1Q9NZC3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 AP005018.1-201ENST00000525475 301 ntBASIC17.27■□□□□ 0.36
GDE1Q9NZC3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 SPDYE22P-201ENST00000582158 798 ntBASIC17.27■□□□□ 0.36
GDE1Q9NZC3 AL138828.2-201ENST00000615812 383 ntBASIC17.27■□□□□ 0.36
GDE1Q9NZC3 SPDYE12P-201ENST00000618416 771 ntBASIC17.27■□□□□ 0.36
GDE1Q9NZC3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.27■□□□□ 0.36
GDE1Q9NZC3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDE1Q9NZC3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 AL662799.1-202ENST00000614205 422 ntBASIC17.26■□□□□ 0.35
GDE1Q9NZC3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 AC108860.2-201ENST00000562760 2183 ntBASIC17.26■□□□□ 0.35
GDE1Q9NZC3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.26■□□□□ 0.35
GDE1Q9NZC3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.25■□□□□ 0.35
GDE1Q9NZC3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 AL353705.2-201ENST00000428243 662 ntBASIC17.25■□□□□ 0.35
GDE1Q9NZC3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.25■□□□□ 0.35
GDE1Q9NZC3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 AC025048.6-201ENST00000634326 1161 ntBASIC17.25■□□□□ 0.35
GDE1Q9NZC3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.25■□□□□ 0.35
GDE1Q9NZC3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDE1Q9NZC3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
GDE1Q9NZC3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms