Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 CNN2P2-201ENST00000443536 909 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 CNN2P3-201ENST00000450201 906 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 MIR3909-201ENST00000579518 119 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AL136317.3-201ENST00000618497 906 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 TUBB3P1-201ENST00000405796 1332 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AL021920.2-201ENST00000624828 1351 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 AC108860.2-201ENST00000562760 2183 ntBASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FBXO28Q9NVF7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
FBXO28Q9NVF7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
FBXO28Q9NVF7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FBXO28Q9NVF7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.39■□□□□ 0.7
FBXO28Q9NVF7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FBXO28Q9NVF7 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AC067863.1-201ENST00000494933 530 ntBASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AP000842.3-202ENST00000569238 1080 ntBASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 AP001350.2-201ENST00000625104 1094 ntBASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.39■□□□□ 0.69
FBXO28Q9NVF7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC093214.1-201ENST00000511688 1107 ntBASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC008267.7-201ENST00000624570 1194 ntBASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 LINC00895-201ENST00000629028 1637 ntBASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FBXO28Q9NVF7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 AC092068.3-201ENST00000587894 2016 ntBASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.37■□□□□ 0.69
FBXO28Q9NVF7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms