Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRTM1Q9HBL6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRTM1Q9HBL6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRTM1Q9HBL6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 KRT16P4-201ENST00000453883 522 ntBASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 AC138894.3-201ENST00000603787 634 ntBASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 AP005117.1-201ENST00000584346 1413 ntBASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 AC006449.5-201ENST00000610658 2098 ntBASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRTM1Q9HBL6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms