Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 AL049597.2-201ENST00000565575 961 ntBASIC16.29■□□□□ 0.2
PIF1Q9H611 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.29■□□□□ 0.2
PIF1Q9H611 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PIF1Q9H611 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.29■□□□□ 0.2
PIF1Q9H611 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PIF1Q9H611 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.29■□□□□ 0.2
PIF1Q9H611 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PIF1Q9H611 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
PIF1Q9H611 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 AC011270.2-201ENST00000624293 2550 ntBASIC16.28■□□□□ 0.2
PIF1Q9H611 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PIF1Q9H611 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.28■□□□□ 0.2
PIF1Q9H611 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PIF1Q9H611 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 EGFEM1P-202ENST00000431685 1563 ntBASIC16.28■□□□□ 0.2
PIF1Q9H611 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PIF1Q9H611 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PIF1Q9H611 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PIF1Q9H611 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.28■□□□□ 0.2
PIF1Q9H611 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.27■□□□□ 0.2
PIF1Q9H611 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PIF1Q9H611 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.27■□□□□ 0.2
PIF1Q9H611 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PIF1Q9H611 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.27■□□□□ 0.2
PIF1Q9H611 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.27■□□□□ 0.2
PIF1Q9H611 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PIF1Q9H611 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.27■□□□□ 0.2
PIF1Q9H611 AC112907.2-201ENST00000448639 330 ntBASIC16.27■□□□□ 0.2
PIF1Q9H611 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.27■□□□□ 0.2
PIF1Q9H611 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.27■□□□□ 0.2
PIF1Q9H611 AC124947.2-201ENST00000547118 1133 ntBASIC16.27■□□□□ 0.2
PIF1Q9H611 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.27■□□□□ 0.2
PIF1Q9H611 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.27■□□□□ 0.2
PIF1Q9H611 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.27■□□□□ 0.2
PIF1Q9H611 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PIF1Q9H611 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PIF1Q9H611 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.27■□□□□ 0.19
PIF1Q9H611 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.27■□□□□ 0.19
PIF1Q9H611 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PIF1Q9H611 KRT8P10-201ENST00000450021 1447 ntBASIC16.27■□□□□ 0.19
PIF1Q9H611 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PIF1Q9H611 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.27■□□□□ 0.19
PIF1Q9H611 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.27■□□□□ 0.19
PIF1Q9H611 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PIF1Q9H611 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PIF1Q9H611 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PIF1Q9H611 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms