Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 FDX1P1-201ENST00000449115 551 ntBASIC15.65■□□□□ 0.1
TRIM2Q9C040 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.65■□□□□ 0.1
TRIM2Q9C040 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM2Q9C040 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM2Q9C040 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
TRIM2Q9C040 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 RBM17P3-201ENST00000417687 1192 ntBASIC15.64■□□□□ 0.09
TRIM2Q9C040 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 AC106795.1-205ENST00000512851 1056 ntBASIC15.64■□□□□ 0.09
TRIM2Q9C040 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 AP001269.4-201ENST00000609611 512 ntBASIC15.64■□□□□ 0.09
TRIM2Q9C040 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 FLJ16779-201ENST00000612722 7638 ntBASIC15.64■□□□□ 0.09
TRIM2Q9C040 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM2Q9C040 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM2Q9C040 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 AL118508.1-201ENST00000613502 2345 ntBASIC15.63■□□□□ 0.09
TRIM2Q9C040 AL021920.2-201ENST00000624828 1351 ntBASIC15.63■□□□□ 0.09
TRIM2Q9C040 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms