Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 RNA5SP421-201ENST00000516864 134 ntBASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 LINC00895-201ENST00000629028 1637 ntBASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 SPDYE7P-202ENST00000420373 878 ntBASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC107890.1-201ENST00000422478 521 ntBASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC125807.1-201ENST00000483097 614 ntBASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC124947.2-201ENST00000547118 1133 ntBASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 AC021097.1-201ENST00000607902 574 ntBASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC46A2Q9BY10 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 PP12613-201ENST00000424958 2230 ntBASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 AL035633.1-201ENST00000406139 838 ntBASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC46A2Q9BY10 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms