Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL031133.1-201ENST00000406807 723 ntBASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 UPK3BP1-201ENST00000428678 509 ntBASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL671277.2-201ENST00000458060 996 ntBASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL441883.1-201ENST00000566170 1045 ntBASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL358472.4-201ENST00000633140 710 ntBASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFAF3Q9BU61 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AC034232.1-201ENST00000506026 1064 ntBASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AP000550.4-202ENST00000639755 178 ntBASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NDUFAF3Q9BU61 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms